Aliases for ENSG00000257726 Gene

Subcategory (RNA class) for ENSG00000257726 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000257726 Gene

  • Novel Transcript 5
  • Lnc-MAP1LC3B2-18 168
  • HSALNG0094276 167
  • AC078880.2 5

External Ids for ENSG00000257726 Gene

Previous GeneCards Identifiers for ENSG00000257726 Gene

  • GC12P115800

Summaries for ENSG00000257726 Gene

GeneCards Summary for ENSG00000257726 Gene

ENSG00000257726 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257726 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257726 Gene

Genomics for ENSG00000257726 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000257726 Gene

Promoters and enhancers for ENSG00000257726 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J115353 Enhancer 1 FANTOM5 ENCODE 0.4 -8.4 -8443 2.2 JUND FOS POLR2A EP300 ATF2 SMARCC2 FOSL2 CEBPB JUN FOSL1 ENSG00000271579 HSALNG0094274 ENSG00000257726
GH12J115351 Enhancer 0.6 Ensembl 0.4 -11.3 -11311 0.2 FOS CEBPB FOXA1 EP300 TCF7L2 ATF2 HLF JUND GATA3 YY1 HSALNG0094274 ENSG00000257726
GH12J115365 Enhancer 0.3 FANTOM5 0.7 +2.5 2534 0.1 VEZF1 piR-32325-046 ENSG00000257726
GH12J115352 Enhancer 0.5 Ensembl 0.4 -10.8 -10811 0.4 ATF2 JUND YY1 CREB1 JUN ATF7 HSALNG0094274 ENSG00000257726
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257726 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000257726 Gene

Genomic Locations for ENSG00000257726 Gene
chr12:115,363,012-115,364,745
(GRCh38/hg38)
Size:
1,734 bases
Orientation:
Plus strand
chr12:115,800,817-115,802,550
(GRCh37/hg19)
Size:
1,734 bases
Orientation:
Plus strand

Genomic View for ENSG00000257726 Gene

Genes around ENSG00000257726 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000257726 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257726 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257726 Gene

Proteins for ENSG00000257726 Gene

Post-translational modifications for ENSG00000257726 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257726 Gene

Domains & Families for ENSG00000257726 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257726 Gene

Function for ENSG00000257726 Gene

Phenotypes From GWAS Catalog for ENSG00000257726 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257726 Gene

Localization for ENSG00000257726 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257726 Gene

Pathways & Interactions for ENSG00000257726 Gene

PathCards logo

SuperPathways for ENSG00000257726 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000257726 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257726 Gene

Drugs & Compounds for ENSG00000257726 Gene

No Compound Related Data Available

Transcripts for ENSG00000257726 Gene

mRNA/cDNA for ENSG00000257726 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257726 Gene

No ASD Table

Relevant External Links for ENSG00000257726 Gene

GeneLoc Exon Structure for
ENSG00000257726

Expression for ENSG00000257726 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257726 Gene

mRNA expression in normal human tissues for ENSG00000257726 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257726 Gene

This gene is overexpressed in Bladder (x19.1), Minor Salivary Gland (x9.9), Prostate (x9.2), and Skin - Sun Exposed (Lower leg) (x5.5).
genes like me logo Genes that share expression patterns with ENSG00000257726: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257726 Gene

Orthologs for ENSG00000257726 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for ENSG00000257726 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 31
  • 98 (a)
OneToOne
Species where no ortholog for ENSG00000257726 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000257726 Gene

ENSEMBL:
Gene Tree for ENSG00000257726 (if available)
TreeFam:
Gene Tree for ENSG00000257726 (if available)

Paralogs for ENSG00000257726 Gene

No data available for Paralogs for ENSG00000257726 Gene

Variants for ENSG00000257726 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257726 Gene

Disorders for ENSG00000257726 Gene

No disorders were found for ENSG00000257726 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257726 Gene

Publications for ENSG00000257726 Gene

No publications were found for ENSG00000257726 Gene.

No data available for Mastermind for ENSG00000257726 Gene

Products for ENSG00000257726 Gene

Sources for ENSG00000257726 Gene