Aliases for ENSG00000257500 Gene

Subcategory (RNA class) for ENSG00000257500 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000257500 Gene

  • Novel Transcript, Antisense To KRT75 And KRT82 5
  • NONHSAG011195 94
  • AC055736.1 5

External Ids for ENSG00000257500 Gene

Previous GeneCards Identifiers for ENSG00000257500 Gene

  • GC12P052801

Summaries for ENSG00000257500 Gene

GeneCards Summary for ENSG00000257500 Gene

ENSG00000257500 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257500 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257500 Gene

Genomics for ENSG00000257500 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000257500 Gene

Promoters and enhancers for ENSG00000257500 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J052406 Promoter 0.3 EPDnew 750.6 -1.3 -1294 0.1 ENSG00000257500 KRT82 KRT84
GH12J053043 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 +642.0 642033 12 ZBTB40 CTCF SREBF1 ZBTB6 MLX RBPJ SMARCE1 POLR2A USF2 NR2F1 TNS2 ENSG00000257337 EIF4B ENSG00000260030 ENSG00000257500 ZNF740 AAAS MAP3K12 TARBP2 NPFF
GH12J053215 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 +813.5 813463 10.3 SIN3A SP1 ZBTB40 CTCF SREBF1 RBPJ SMARCE1 POLR2A HDAC2 NR2F6 RARG lnc-ITGB7-3 SP1 ATF7 PCBP2 ENSG00000260030 ITGB7 ZNF740 ENSG00000257500 AAAS
GH12J053294 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 +890.3 890333 7 ZNF785 SIN3A ZBTB40 ZBTB6 RBPJ SMARCE1 POLR2A HCFC1 MIXL1 ZNF362 C12orf10 PFDN5 piR-50035 piR-46958 ESPL1 AAAS SP1 ZNF740 PCBP2 CBX5
GH12J052894 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 14.6 +495.3 495348 16.1 PPP1R10 E2F8 SIN3A ZBTB40 SP1 CTCF GATA3 SREBF1 ZBTB6 FOXA1 ZNF740 AAAS PCBP2 TARBP2 MAP3K12 SP1 ATF7 ENSG00000257550 EIF4B ENSG00000257808
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257500 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000257500 Gene

Genomic Locations for ENSG00000257500 Gene
chr12:52,407,580-52,428,494
(GRCh38/hg38)
Size:
20,915 bases
Orientation:
Plus strand
chr12:52,801,364-52,822,278
(GRCh37/hg19)
Size:
20,915 bases
Orientation:
Plus strand

Genomic View for ENSG00000257500 Gene

Genes around ENSG00000257500 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000257500 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257500 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257500 Gene

Proteins for ENSG00000257500 Gene

Post-translational modifications for ENSG00000257500 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257500 Gene

Domains & Families for ENSG00000257500 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257500 Gene

Function for ENSG00000257500 Gene

Phenotypes From GWAS Catalog for ENSG00000257500 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257500 Gene

Localization for ENSG00000257500 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257500 Gene

Pathways & Interactions for ENSG00000257500 Gene

PathCards logo

SuperPathways for ENSG00000257500 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257500 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000257500 Gene

Drugs & Compounds for ENSG00000257500 Gene

No Compound Related Data Available

Transcripts for ENSG00000257500 Gene

mRNA/cDNA for ENSG00000257500 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) NONCODE transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257500 Gene

No ASD Table

Relevant External Links for ENSG00000257500 Gene

GeneLoc Exon Structure for
ENSG00000257500

Expression for ENSG00000257500 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000257500 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257500 Gene

This gene is overexpressed in Skin - Not Sun Exposed (Suprapubic) (x36.4) and Skin - Sun Exposed (Lower leg) (x14.4).
genes like me logo Genes that share expression patterns with ENSG00000257500: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257500 Gene

Orthologs for ENSG00000257500 Gene

Evolution for ENSG00000257500 Gene

ENSEMBL:
Gene Tree for ENSG00000257500 (if available)
TreeFam:
Gene Tree for ENSG00000257500 (if available)

No data available for Orthologs for ENSG00000257500 Gene

Paralogs for ENSG00000257500 Gene

No data available for Paralogs for ENSG00000257500 Gene

Variants for ENSG00000257500 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257500 Gene

Disorders for ENSG00000257500 Gene

No disorders were found for ENSG00000257500 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257500 Gene

Publications for ENSG00000257500 Gene

No publications were found for ENSG00000257500 Gene.

No data available for External Links for ENSG00000257500 Gene

Products for ENSG00000257500 Gene

Sources for ENSG00000257500 Gene