Aliases for ENSG00000257452 Gene

Subcategory (RNA class) for ENSG00000257452 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000257452 Gene

  • Novel Transcript, Antisense To OAS1, OAS2 And OAS3 5
  • NONHSAG012342.2 91
  • Lnc-RASAL1-1 165
  • AC004551.1 5

External Ids for ENSG00000257452 Gene

Previous GeneCards Identifiers for ENSG00000257452 Gene

  • GC12M113345

Summaries for ENSG00000257452 Gene

GeneCards Summary for ENSG00000257452 Gene

ENSG00000257452 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257452 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257452 Gene

Genomics for ENSG00000257452 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000257452 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J113018 Enhancer 0.5 Ensembl ENCODE 600.7 -1.7 -1650 2.4 POLR2A JUN ENSG00000257452 OAS3 lnc-DTX1-2 RPS15AP32 DTX1 OAS2
GH12J113039 Enhancer 1.1 FANTOM5 Ensembl ENCODE 5.3 -23.1 -23050 2.8 IKZF1 SP1 CEBPA CEBPB NR3C1 FOS NR2C2 JUND FOSL1 BCOR OAS3 ENSG00000201208 RITA1 DDX54 CFAP73 ENSG00000257452 DTX1 SDSL SLC8B1 OAS2
GH12J112976 Promoter/Enhancer 1.7 EPDnew FANTOM5 Ensembl ENCODE 0.3 +38.7 38670 5.1 REST KDM1A POLR2A ZNF143 RELA SMAD5 IKZF2 RCOR1 SP1 TRIM22 OAS2 OAS3 DTX1 OAS1 SLC8B1 SDSL ENSG00000257452 IMMP1LP2
GH12J112936 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.2 +79.4 79382 4.1 HNRNPL GATAD2A PRDM10 REST ZNF512 IKZF1 KDM1A RCOR2 BACH1 ETV6 OAS3 TRAFD1 OAS1 piR-50968-032 ENSG00000257452
GH12J113031 Enhancer 0.9 Ensembl ENCODE 0.4 -13.3 -13252 0.8 CTCF PRDM1 RAD21 TRIM22 MCM7 CTBP1 ZNF444 SMC3 ZBTB17 ZNF217 OAS3 DTX1 OAS1 ENSG00000201208 RITA1 DDX54 CFAP73 ENSG00000257452 lnc-DTX1-2 RPS15AP32
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257452 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000257452 Gene

Genomic Locations for ENSG00000257452 Gene
chr12:112,907,628-113,017,751
(GRCh38/hg38)
Size:
110,124 bases
Orientation:
Minus strand
chr12:113,345,433-113,455,556
(GRCh37/hg19)
Size:
110,124 bases
Orientation:
Minus strand

Genomic View for ENSG00000257452 Gene

Genes around ENSG00000257452 on UCSC Golden Path with GeneCards custom track
ENSG00000257452 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000257452 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257452 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257452 Gene

Proteins for ENSG00000257452 Gene

Post-translational modifications for ENSG00000257452 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257452 Gene

Domains & Families for ENSG00000257452 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257452 Gene

Function for ENSG00000257452 Gene

Phenotypes From GWAS Catalog for ENSG00000257452 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257452 Gene

Localization for ENSG00000257452 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257452 Gene

Pathways & Interactions for ENSG00000257452 Gene

PathCards logo

SuperPathways for ENSG00000257452 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257452 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257452 Gene

Drugs & Compounds for ENSG00000257452 Gene

No Compound Related Data Available

Transcripts for ENSG00000257452 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000257452 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004AC9E8_9606 lncRNA 575 3

Ensembl: ENST00000552784 (view in UCSC) ,

LNCipedia: lnc-RASAL1-1:1,

NONCODE: NONHSAT030813.2,

ENSG00000257452 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257452 Gene

No ASD Table

Relevant External Links for ENSG00000257452 Gene

GeneLoc Exon Structure for
ENSG00000257452

No data available for mRNA/cDNA for ENSG00000257452 Gene

Expression for ENSG00000257452 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257452 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257452 Gene

This gene is overexpressed in Whole Blood (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000257452: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257452 Gene

Orthologs for ENSG00000257452 Gene

Evolution for ENSG00000257452 Gene

ENSEMBL:
Gene Tree for ENSG00000257452 (if available)
TreeFam:
Gene Tree for ENSG00000257452 (if available)

No data available for Orthologs for ENSG00000257452 Gene

Paralogs for ENSG00000257452 Gene

No data available for Paralogs for ENSG00000257452 Gene

Variants for ENSG00000257452 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257452 Gene

Disorders for ENSG00000257452 Gene

Additional Disease Information for ENSG00000257452

No disorders were found for ENSG00000257452 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000257452 Gene

Publications for ENSG00000257452 Gene

No publications were found for ENSG00000257452 Gene.

No data available for Mastermind for ENSG00000257452 Gene

Products for ENSG00000257452 Gene

Sources for ENSG00000257452 Gene