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Aliases for ENSG00000257443 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000257443 Gene

  • Novel Transcript, Antisense To LRIG3 5
  • AC068305.2 5

External Ids for ENSG00000257443 Gene

Previous GeneCards Identifiers for ENSG00000257443 Gene

  • GC12P059315

Summaries for ENSG00000257443 Gene

GeneCards Summary for ENSG00000257443 Gene

ENSG00000257443 is an RNA Gene.

Additional gene information for ENSG00000257443 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000257443 Gene

Genomics for ENSG00000257443 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000257443 Gene

Promoters and enhancers for ENSG00000257443 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J058913 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 605.7 -1.7 -1732 9.9 ELF3 MNT CEBPG ZSCAN21 TFE3 SP7 POLR2A SP1 PRDM1 ZNF644 LRIG3 ENSG00000257443 LOC105369791 LINC02388
GH12J058932 Enhancer 0.9 Ensembl ENCODE 5.3 +12.4 12448 1 YY1 GLIS2 ZBTB8A PRDM10 ZIC2 ZEB2 ZNF629 SCRT2 ZBTB44 ZXDB ENSG00000257443 LOC105369791 GC12P058951
GH12J058924 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.7 +4.9 4910 2.9 YY1 SP7 KLF14 PRDM1 MZF1 ZNF680 ZNF488 PRDM10 ZSCAN4 ZEB2 ENSG00000257443 LOC105369791 GC12P058951
GH12J058967 Enhancer 0.7 VISTA 0.3 +48.7 48654 2.9 PRDM4 ATF2 ZNF843 PRDM6 ZBTB21 LRIG3 PIR32931 GC12P058953 ENSG00000257443 LOC105369791 RPS6P22
GH12J058949 Enhancer 0.5 ENCODE 0.3 +30.0 29983 1.7 ZIC2 SCRT2 SCRT1 FOS YY2 ZNF398 GC12P058951 GC12P058953 PIR32931 LRIG3 LOC105369791 ENSG00000257443
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257443 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000257443 Gene

Genomic Locations for ENSG00000257443 Gene
chr12:58,920,639-59,064,238
(GRCh38/hg38)
Size:
143,600 bases
Orientation:
Plus strand
chr12:59,314,420-59,458,019
(GRCh37/hg19)
Size:
143,600 bases
Orientation:
Plus strand

Genomic View for ENSG00000257443 Gene

Genes around ENSG00000257443 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000257443 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257443 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257443 Gene

Proteins for ENSG00000257443 Gene

Post-translational modifications for ENSG00000257443 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257443 Gene

Domains & Families for ENSG00000257443 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000257443 Gene

Function for ENSG00000257443 Gene

Phenotypes From GWAS Catalog for ENSG00000257443 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257443 Gene

Localization for ENSG00000257443 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257443 Gene

Pathways & Interactions for ENSG00000257443 Gene

PathCards logo

SuperPathways for ENSG00000257443 Gene

No Data Available

Interacting Proteins for ENSG00000257443 Gene

Gene Ontology (GO) - Biological Process for ENSG00000257443 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000257443 Gene

Drugs & Compounds for ENSG00000257443 Gene

No Compound Related Data Available

Transcripts for ENSG00000257443 Gene

mRNA/cDNA for ENSG00000257443 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257443 Gene

No ASD Table

Relevant External Links for ENSG00000257443 Gene

GeneLoc Exon Structure for
ENSG00000257443

Expression for ENSG00000257443 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000257443 Gene

genes like me logo Genes that share expression patterns with ENSG00000257443: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257443 Gene

Orthologs for ENSG00000257443 Gene

Evolution for ENSG00000257443 Gene

ENSEMBL:
Gene Tree for ENSG00000257443 (if available)
TreeFam:
Gene Tree for ENSG00000257443 (if available)

No data available for Orthologs for ENSG00000257443 Gene

Paralogs for ENSG00000257443 Gene

No data available for Paralogs for ENSG00000257443 Gene

Variants for ENSG00000257443 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257443 Gene

Disorders for ENSG00000257443 Gene

No disorders were found for ENSG00000257443 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257443 Gene

Publications for ENSG00000257443 Gene

No publications were found for ENSG00000257443 Gene.

No data available for External Links for ENSG00000257443 Gene

Products for ENSG00000257443 Gene

Sources for ENSG00000257443 Gene

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