Aliases for ENSG00000257194 Gene

Subcategory (RNA class) for ENSG00000257194 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000257194 Gene

  • Novel Transcript 5
  • HSALNG0092958 169
  • NONHSAG011877 94
  • Lnc-TMTC3-5 170
  • AC126178.1 5

External Ids for ENSG00000257194 Gene

Previous GeneCards Identifiers for ENSG00000257194 Gene

  • GC12P090502

Summaries for ENSG00000257194 Gene

GeneCards Summary for ENSG00000257194 Gene

ENSG00000257194 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257194 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257194 Gene

Genomics for ENSG00000257194 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000257194 Gene

Promoters and enhancers for ENSG00000257194 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J090106 Enhancer 0.2 Ensembl 750.6 -0.9 -939 0.4 ENSG00000257194 lnc-ATP2B1-7 LOC105369890
GH12J089704 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 4.7 -399.4 -399439 7.4 ZNF24 SP1 SREBF1 FOXA1 RBPJ POLR2A TCF7L2 USF2 ATF1 CREB1 ATP2B1 ATP2B1-AS1 ENSG00000258302 RNU6-148P ENSG00000257194 lnc-POC1B-GALNT4-3
GH12J089645 Enhancer 1 Ensembl ENCODE 4.3 -460.8 -460839 5.8 GATA3 SMARCE1 TCF7L2 NR2F1 NR2F6 ZNF217 L3MBTL2 DACH1 TEAD4 ZNF652 ENSG00000257194 lnc-POC1B-GALNT4-3 ATP2B1 ATP2B1-AS1
GH12J089663 Enhancer 0.8 ENCODE 4.3 -443.6 -443569 1.2 SMARCE1 DACH1 TEAD4 BCL6B CBFA2T2 SMARCA4 PRDM1 TRIM24 MTA1 GMEB1 ENSG00000257194 ATP2B1-AS1 ATP2B1 lnc-POC1B-GALNT4-3
GH12J089636 Enhancer 0.6 Ensembl ENCODE 4.3 -471.0 -471038 2.2 SP1 FOS JUNB FOSL2 ENSG00000257194 lnc-POC1B-GALNT4-3 ATP2B1 ATP2B1-AS1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257194 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000257194 Gene

Genomic Locations for ENSG00000257194 Gene
chr12:90,107,739-90,112,779
(GRCh38/hg38)
Size:
5,041 bases
Orientation:
Plus strand
chr12:90,501,516-90,506,556
(GRCh37/hg19)
Size:
5,041 bases
Orientation:
Plus strand

Genomic View for ENSG00000257194 Gene

Genes around ENSG00000257194 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000257194 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257194 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257194 Gene

Proteins for ENSG00000257194 Gene

Post-translational modifications for ENSG00000257194 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257194 Gene

Domains & Families for ENSG00000257194 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257194 Gene

Function for ENSG00000257194 Gene

Phenotypes From GWAS Catalog for ENSG00000257194 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257194 Gene

Localization for ENSG00000257194 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257194 Gene

Pathways & Interactions for ENSG00000257194 Gene

PathCards logo

SuperPathways for ENSG00000257194 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000257194 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000257194 Gene

Drugs & Compounds for ENSG00000257194 Gene

No Compound Related Data Available

Transcripts for ENSG00000257194 Gene

mRNA/cDNA for ENSG00000257194 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(11) RNACentral transcripts :
(10) LNCipedia transcripts :
(3) NONCODE transcripts :
(9) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257194 Gene

No ASD Table

Relevant External Links for ENSG00000257194 Gene

GeneLoc Exon Structure for
ENSG00000257194

Expression for ENSG00000257194 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000257194 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000257194 Gene

This gene is overexpressed in Colon - Transverse (x4.0).
genes like me logo Genes that share expression patterns with ENSG00000257194: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257194 Gene

Orthologs for ENSG00000257194 Gene

Evolution for ENSG00000257194 Gene

ENSEMBL:
Gene Tree for ENSG00000257194 (if available)
TreeFam:
Gene Tree for ENSG00000257194 (if available)

No data available for Orthologs for ENSG00000257194 Gene

Paralogs for ENSG00000257194 Gene

No data available for Paralogs for ENSG00000257194 Gene

Variants for ENSG00000257194 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257194 Gene

Disorders for ENSG00000257194 Gene

No disorders were found for ENSG00000257194 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257194 Gene

Publications for ENSG00000257194 Gene

No publications were found for ENSG00000257194 Gene.

No data available for External Links for ENSG00000257194 Gene

Products for ENSG00000257194 Gene

Sources for ENSG00000257194 Gene