Aliases for ENSG00000257042 Gene

Subcategory (RNA class) for ENSG00000257042 Gene

lncRNA

Number of RNA Genes sources:

2 / 14

Aliases for ENSG00000257042 Gene

  • Novel Transcript, Antisense To PTHLH 5
  • NONHSAG010764 92
  • HSALNG0090050 167
  • AC008011.2 5

External Ids for ENSG00000257042 Gene

Previous GeneCards Identifiers for ENSG00000257042 Gene

  • GC12P028111

Summaries for ENSG00000257042 Gene

GeneCards Summary for ENSG00000257042 Gene

ENSG00000257042 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000257042 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000257042 Gene

Genomics for ENSG00000257042 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000257042 Gene

Promoters and enhancers for ENSG00000257042 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J027778 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 9.6 -177.8 -177764 3.7 NRF1 POLR2G PHF8 ZFX ZNF10 ZIC2 POLR2A ZBTB11 ZBTB26 UBTF ENSG00000256747 KLHL42 piR-47702 ENSG00000257042
GH12J028021 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +66.5 66483 7.6 TCF12 JUND FOS KDM6A POLR2A TCF7 FOXA1 ZBTB25 SKI SMARCC2 PTHLH ENSG00000257042 ENSG00000256377 piR-49322-121 lnc-CCDC91-1
GH12J028031 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.3 +75.6 75617 4.5 FOS TAF9B ZNF316 GABPA FOSL2 ATF3 ZNF592 PBX2 JUN NFE2 ENSG00000257042 PTHLH ENSG00000256377 piR-49322-121 lnc-CCDC91-1
GH12J027980 Enhancer 1.1 Ensembl ENCODE dbSUPER 11.4 +24.4 24386 4.7 TCF12 FOS REST RFX1 CTBP1 HDAC3 NCOR1 ZNF316 NFIC FOSL2 ENSG00000257042 piR-33614-054 PTHLH
GH12J027964 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 5 +11.3 11277 9.8 ZSCAN5C TCF12 NRF1 JUND FOS ZNF639 CTCF ZNF10 ZIC2 POLR2A PTHLH ENSG00000257042 SMCO2 MANSC4 lnc-MANSC4-8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000257042 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000257042 Gene

Genomic Locations for ENSG00000257042 Gene
chr12:27,958,517-27,969,813
(GRCh38/hg38)
Size:
11,297 bases
Orientation:
Plus strand
chr12:28,111,450-28,122,746
(GRCh37/hg19)
Size:
11,297 bases
Orientation:
Plus strand

Genomic View for ENSG00000257042 Gene

Genes around ENSG00000257042 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000257042 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000257042 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000257042 Gene

Proteins for ENSG00000257042 Gene

Post-translational modifications for ENSG00000257042 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000257042 Gene

Domains & Families for ENSG00000257042 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000257042 Gene

Function for ENSG00000257042 Gene

Phenotypes From GWAS Catalog for ENSG00000257042 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000257042 Gene

Localization for ENSG00000257042 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000257042 Gene

Pathways & Interactions for ENSG00000257042 Gene

PathCards logo

SuperPathways for ENSG00000257042 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000257042 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000257042 Gene

Drugs & Compounds for ENSG00000257042 Gene

No Compound Related Data Available

Transcripts for ENSG00000257042 Gene

mRNA/cDNA for ENSG00000257042 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 NONCODE transcripts :
1 LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000257042 Gene

No ASD Table

Relevant External Links for ENSG00000257042 Gene

GeneLoc Exon Structure for
ENSG00000257042

Expression for ENSG00000257042 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000257042 Gene

genes like me logo Genes that share expression patterns with ENSG00000257042: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000257042 Gene

Orthologs for ENSG00000257042 Gene

Evolution for ENSG00000257042 Gene

ENSEMBL:
Gene Tree for ENSG00000257042 (if available)
TreeFam:
Gene Tree for ENSG00000257042 (if available)

No data available for Orthologs for ENSG00000257042 Gene

Paralogs for ENSG00000257042 Gene

No data available for Paralogs for ENSG00000257042 Gene

Variants for ENSG00000257042 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000257042 Gene

Disorders for ENSG00000257042 Gene

No disorders were found for ENSG00000257042 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000257042 Gene

Publications for ENSG00000257042 Gene

No publications were found for ENSG00000257042 Gene.

No data available for Mastermind for ENSG00000257042 Gene

Products for ENSG00000257042 Gene

Sources for ENSG00000257042 Gene