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Aliases for ENSG00000256861 Gene

Aliases for ENSG00000256861 Gene

  • AC048338.1 5

External Ids for ENSG00000256861 Gene

Previous GeneCards Identifiers for ENSG00000256861 Gene

  • GC12M122693
  • GC12M122694

Summaries for ENSG00000256861 Gene

GeneCards Summary for ENSG00000256861 Gene

ENSG00000256861 is a Protein Coding gene. An important paralog of this gene is VPS33A.

Additional gene information for ENSG00000256861 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000256861 Gene

Genomics for ENSG00000256861 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256861 Gene

Promoters and enhancers for ENSG00000256861 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I122265 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 550.8 +0.1 60 2.6 CLOCK MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ENSG00000256861 VPS33A RSRC2 C12orf65 ZCCHC8 ENSG00000235423 ANAPC5 ENSG00000272849 SETD1B LINC01089
GH12I122222 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 11.3 +40.6 40630 6.2 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B CBX5 DIABLO LOC101593348 ZCCHC8 RSRC2 SETD1B KNTC1 LINC01089 PSMD9 VPS33A ENSG00000256861
GH12I122365 Enhancer 1.5 Ensembl ENCODE dbSUPER 11.1 -101.5 -101462 4.8 PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF766 ZNF213 CLIP1 ZCCHC8 RSRC2 ENSG00000235423 ANAPC5 SETD1B DIABLO ENSG00000252192 VPS33A ENSG00000256861
GH12I122317 Enhancer 0.7 Ensembl ENCODE 11.7 -52.5 -52458 1.8 JUND JUN HLF CEBPB FOS REST VPS33A CCDC150P1 ENSG00000256861 DIABLO HCAR3 CDK2AP1 ZCCHC8 ABCB9 GC12M122268 CLIP1
GH12I122350 Enhancer 0.6 ENCODE dbSUPER 10.6 -84.1 -84068 0.7 REST RAD21 ENSG00000252192 DIABLO ENSG00000256861 VPS33A RPL21P1 CCDC150P1 CLIP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000256861 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256861 Gene

Genomic Locations for ENSG00000256861 Gene
chr12:122,207,779-122,266,423
(GRCh38/hg38)
Size:
58,645 bases
Orientation:
Minus strand
chr12:122,692,326-122,750,970
(GRCh37/hg19)

Genomic View for ENSG00000256861 Gene

Genes around ENSG00000256861 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256861 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256861 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256861 Gene

Proteins for ENSG00000256861 Gene

  • Protein details for ENSG00000256861 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    H3BMM5
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    H3BMM5

    Protein attributes for ENSG00000256861 Gene

    Size:
    538 amino acids
    Molecular mass:
    61238 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000256861 Gene

Post-translational modifications for ENSG00000256861 Gene

No Post-translational modifications

Other Protein References for ENSG00000256861 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000256861 Gene

Domains & Families for ENSG00000256861 Gene

Protein Domains for ENSG00000256861 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000256861: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000256861 Gene

Function for ENSG00000256861 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256861 Gene

Localization for ENSG00000256861 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256861 Gene

Pathways & Interactions for ENSG00000256861 Gene

SuperPathways for ENSG00000256861 Gene

No Data Available

Interacting Proteins for ENSG00000256861 Gene

Gene Ontology (GO) - Biological Process for ENSG00000256861 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016192 vesicle-mediated transport IEA --
genes like me logo Genes that share ontologies with ENSG00000256861: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000256861 Gene

Drugs & Compounds for ENSG00000256861 Gene

No Compound Related Data Available

Transcripts for ENSG00000256861 Gene

mRNA/cDNA for ENSG00000256861 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256861 Gene

No ASD Table

Relevant External Links for ENSG00000256861 Gene

GeneLoc Exon Structure for
ENSG00000256861

Expression for ENSG00000256861 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000256861 Gene

mRNA expression in normal human tissues for ENSG00000256861 Gene
genes like me logo Genes that share expression patterns with ENSG00000256861: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256861 Gene

Orthologs for ENSG00000256861 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for ENSG00000256861 Gene

Organism Taxonomy Gene Similarity Type Details
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 89 (a)
ManyToMany
-- 34
  • 82 (a)
ManyToMany
chimpanzee
(Pan troglodytes)
Mammalia VPS33A 34
  • 89 (a)
OneToMany
cow
(Bos Taurus)
Mammalia VPS33A 34
  • 88 (a)
OneToMany
dog
(Canis familiaris)
Mammalia -- 34
  • 87 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Vps33a 34
  • 87 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 84 (a)
OneToMany
chicken
(Gallus gallus)
Aves -- 34
  • 81 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 81 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii BX510999.1 34
  • 75 (a)
ManyToMany
vps33a 34
  • 74 (a)
ManyToMany
fruit fly
(Drosophila melanogaster)
Insecta car 34
  • 38 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea vps-33.1 34
  • 22 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes VPS33 34
  • 18 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.3653 34
  • 49 (a)
OneToMany
Species where no ortholog for ENSG00000256861 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for ENSG00000256861 Gene

ENSEMBL:
Gene Tree for ENSG00000256861 (if available)
TreeFam:
Gene Tree for ENSG00000256861 (if available)

Paralogs for ENSG00000256861 Gene

Paralogs for ENSG00000256861 Gene

genes like me logo Genes that share paralogs with ENSG00000256861: view

Variants for ENSG00000256861 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256861 Gene

Disorders for ENSG00000256861 Gene

No disorders were found for ENSG00000256861 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256861 Gene

Publications for ENSG00000256861 Gene

No publications were found for ENSG00000256861 Gene.

Products for ENSG00000256861 Gene

Sources for ENSG00000256861 Gene

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