Aliases for ENSG00000256789 Gene

Subcategory (RNA class) for ENSG00000256789 Gene

lncRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000256789 Gene

  • Novel Transcript 5
  • HSALNG0084708 169
  • NONHSAG008568 94
  • AP000753.2 5

External Ids for ENSG00000256789 Gene

Previous GeneCards Identifiers for ENSG00000256789 Gene

  • GC11P063405

Summaries for ENSG00000256789 Gene

GeneCards Summary for ENSG00000256789 Gene

ENSG00000256789 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256789 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256789 Gene

Genomics for ENSG00000256789 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256789 Gene

Promoters and enhancers for ENSG00000256789 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J063635 Enhancer 0.8 Ensembl ENCODE 750.6 -1.7 -1740 0.7 CTCF CC2D1A RAD21 ARID2 REST TRIM22 ZNF143 HDGF SMC3 NBN ENSG00000256789 HSALNG0084707 ATL3
GH11J063639 Enhancer 0.6 Ensembl ENCODE 750.6 +1.8 1824 0.6 CTCF RAD21 ZNF121 ZNF384 TRIM22 ENSG00000256789 ATL3 piR-30667
GH11J063489 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.3 -146.8 -146827 3.7 RBPJ SMARCE1 NR2F6 CREB1 MYC HLF MAX TEAD4 RERE MLLT1 PLAAT5 RF00005-039 ENSG00000203520 PLAAT3 ENSG00000256789 BSCL2 ATL3
GH11J063530 Promoter/Enhancer 2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.9 -102.5 -102475 8.1 SP1 SMARCE1 L3MBTL2 MAX RAD21 TEAD4 ZKSCAN8 ZNF148 ZFX CBFA2T2 PLAAT4 AHNAK CSKMT LRRN4CL ATL3 GANAB SNHG1 PLAAT2 PLAAT3 ENSG00000203520
GH11J063563 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 10.7 -71.7 -71671 5.8 SIN3A SP1 SMARCE1 MYC CC2D1A RELA L3MBTL2 MAX DACH1 SREBF1 PLAAT2 PLAAT4 TTC9C ENSG00000203520 PLAAT3 ENSG00000256789 NXF1 OTUB1 RF00017-936
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256789 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256789 Gene

Genomic Locations for ENSG00000256789 Gene
chr11:63,637,677-63,658,962
(GRCh38/hg38)
Size:
21,286 bases
Orientation:
Plus strand
chr11:63,405,149-63,426,434
(GRCh37/hg19)
Size:
21,286 bases
Orientation:
Plus strand

Genomic View for ENSG00000256789 Gene

Genes around ENSG00000256789 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256789 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256789 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256789 Gene

Proteins for ENSG00000256789 Gene

Post-translational modifications for ENSG00000256789 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256789 Gene

Domains & Families for ENSG00000256789 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256789 Gene

Function for ENSG00000256789 Gene

Phenotypes From GWAS Catalog for ENSG00000256789 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256789 Gene

Localization for ENSG00000256789 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256789 Gene

Pathways & Interactions for ENSG00000256789 Gene

PathCards logo

SuperPathways for ENSG00000256789 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000256789 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000256789 Gene

Drugs & Compounds for ENSG00000256789 Gene

No Compound Related Data Available

Transcripts for ENSG00000256789 Gene

mRNA/cDNA for ENSG00000256789 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256789 Gene

No ASD Table

Relevant External Links for ENSG00000256789 Gene

GeneLoc Exon Structure for
ENSG00000256789

Expression for ENSG00000256789 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000256789 Gene

genes like me logo Genes that share expression patterns with ENSG00000256789: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256789 Gene

Orthologs for ENSG00000256789 Gene

Evolution for ENSG00000256789 Gene

ENSEMBL:
Gene Tree for ENSG00000256789 (if available)
TreeFam:
Gene Tree for ENSG00000256789 (if available)

No data available for Orthologs for ENSG00000256789 Gene

Paralogs for ENSG00000256789 Gene

No data available for Paralogs for ENSG00000256789 Gene

Variants for ENSG00000256789 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256789 Gene

Disorders for ENSG00000256789 Gene

No disorders were found for ENSG00000256789 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256789 Gene

Publications for ENSG00000256789 Gene

No publications were found for ENSG00000256789 Gene.

No data available for External Links for ENSG00000256789 Gene

Products for ENSG00000256789 Gene

Sources for ENSG00000256789 Gene