Aliases for ENSG00000256733 Gene

Subcategory (RNA class) for ENSG00000256733 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000256733 Gene

  • Novel Transcript 5
  • NONHSAG008452 94
  • HSALNG0084492 169
  • AP003721.2 5
  • Lnc-CD5-1 170

External Ids for ENSG00000256733 Gene

Previous GeneCards Identifiers for ENSG00000256733 Gene

  • GC11P060823

Summaries for ENSG00000256733 Gene

GeneCards Summary for ENSG00000256733 Gene

ENSG00000256733 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256733 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256733 Gene

Genomics for ENSG00000256733 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256733 Gene

Promoters and enhancers for ENSG00000256733 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J061056 Enhancer 0.5 Ensembl 750.6 +1.7 1709 0.6 CREM IKZF1 TRIM22 EED BCL11A NR2F1 CTCF ENSG00000256733 CD6 MF281430-012 lnc-VPS37C-3 LOC105369325
GH11J061054 Enhancer 0.3 Ensembl dbSUPER 750.6 -1.1 -1091 3.8 ENSG00000256733 CD6 RF00017-927 lnc-VPS37C-3 LOC105369325
GH11J062041 Enhancer 1.3 Ensembl ENCODE dbSUPER 14.6 +990.0 990009 8.4 ZBTB40 SREBF1 SMARCE1 POLR2A ZNF217 RUNX1 CC2D1A ELF1 L3MBTL2 DACH1 CSKMT SNHG1 CPSF7 GANAB TAF6L ENSG00000256690 MTA2 TMEM138 NXF1 TUT1
GH11J061040 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -12.9 -12930 3 ETV6 RELA POLR2A MLLT1 ZNF687 CREM IKZF1 RNF2 BACH1 SMAD5 CD6 CD5 SLC15A3 TMEM132A SDHAF2 RF00017-927 ENSG00000256733 lnc-VPS37C-3 LOC105369325
GH11J061060 Enhancer 0.9 ENCODE dbSUPER 0.4 +6.1 6071 1.8 SP1 ETV6 RELA CEBPB MLLT1 CREM ZBED1 IKZF1 CREB1 BACH1 MF281430-012 ENSG00000256733 LOC105369325 lnc-VPS37C-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256733 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256733 Gene

Genomic Locations for ENSG00000256733 Gene
chr11:61,055,392-61,067,597
(GRCh38/hg38)
Size:
12,206 bases
Orientation:
Plus strand
chr11:60,823,209-60,835,007
(GRCh37/hg19)
Size:
11,799 bases
Orientation:
Plus strand

Genomic View for ENSG00000256733 Gene

Genes around ENSG00000256733 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256733 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256733 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256733 Gene

Proteins for ENSG00000256733 Gene

Post-translational modifications for ENSG00000256733 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256733 Gene

Domains & Families for ENSG00000256733 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256733 Gene

Function for ENSG00000256733 Gene

Phenotypes From GWAS Catalog for ENSG00000256733 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256733 Gene

Localization for ENSG00000256733 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256733 Gene

Pathways & Interactions for ENSG00000256733 Gene

PathCards logo

SuperPathways for ENSG00000256733 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000256733 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000256733 Gene

Drugs & Compounds for ENSG00000256733 Gene

No Compound Related Data Available

Transcripts for ENSG00000256733 Gene

mRNA/cDNA for ENSG00000256733 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256733 Gene

No ASD Table

Relevant External Links for ENSG00000256733 Gene

GeneLoc Exon Structure for
ENSG00000256733

Expression for ENSG00000256733 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000256733 Gene

genes like me logo Genes that share expression patterns with ENSG00000256733: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256733 Gene

Orthologs for ENSG00000256733 Gene

Evolution for ENSG00000256733 Gene

ENSEMBL:
Gene Tree for ENSG00000256733 (if available)
TreeFam:
Gene Tree for ENSG00000256733 (if available)

No data available for Orthologs for ENSG00000256733 Gene

Paralogs for ENSG00000256733 Gene

No data available for Paralogs for ENSG00000256733 Gene

Variants for ENSG00000256733 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256733 Gene

Disorders for ENSG00000256733 Gene

No disorders were found for ENSG00000256733 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256733 Gene

Publications for ENSG00000256733 Gene

No publications were found for ENSG00000256733 Gene.

No data available for External Links for ENSG00000256733 Gene

Products for ENSG00000256733 Gene

Sources for ENSG00000256733 Gene