Aliases for ENSG00000256733 Gene

Subcategory (RNA class) for ENSG00000256733 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000256733 Gene

  • Novel Transcript 5
  • NONHSAG008452 92
  • HSALNG0084492 167
  • AP003721.2 5
  • Lnc-CD5-1 168

External Ids for ENSG00000256733 Gene

Previous GeneCards Identifiers for ENSG00000256733 Gene

  • GC11P060823

Summaries for ENSG00000256733 Gene

GeneCards Summary for ENSG00000256733 Gene

ENSG00000256733 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256733 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256733 Gene

Genomics for ENSG00000256733 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256733 Gene

Promoters and enhancers for ENSG00000256733 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J061056 Enhancer 0.6 Ensembl 500.7 +1.7 1709 0.6 BCL11A IKZF1 NR2F1 CTCF RAD21 TBX21 BCL3 CREM MTA2 TRIM22 ENSG00000256733 CD6 MF281430-012 lnc-VPS37C-3 LOC105369325
GH11J061054 Enhancer 0.6 Ensembl dbSUPER 500.7 -1.1 -1091 3.8 CTCF ZNF184 CEBPB ENSG00000256733 CD6 RF00017-927 lnc-VPS37C-3 LOC105369325
GH11J061040 Enhancer 1.3 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 0.4 -12.9 -12930 3 ZBTB40 EP300 RELA MEF2C POLR2A BCL11A SMC3 MEF2B NBN IKZF1 CD6 CD5 SLC15A3 TMEM132A SDHAF2 RF00017-927 ENSG00000256733 LOC105369325 lnc-VPS37C-3
GH11J061060 Enhancer 1 ENCODE dbSUPER 0.4 +6.1 6071 1.8 SP1 EP300 RELA MEF2C RCOR1 TRIM22 BCL11A TCF12 CREB1 CBFB MF281430-012 ENSG00000256733 LOC105369325 lnc-VPS37C-3
GH11J061049 Enhancer 0.7 Ensembl dbSUPER 0.4 -5.5 -5491 1.8 ZNF316 MAFF BMI1 SMARCA4 RNF2 EZH2 CBX8 CD6 ENSG00000256733 RF00017-927 lnc-VPS37C-3 LOC105369325
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256733 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256733 Gene

Genomic Locations for ENSG00000256733 Gene
chr11:61,055,392-61,067,597
(GRCh38/hg38)
Size:
12,206 bases
Orientation:
Plus strand
chr11:60,823,209-60,835,007
(GRCh37/hg19)
Size:
11,799 bases
Orientation:
Plus strand

Genomic View for ENSG00000256733 Gene

Genes around ENSG00000256733 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256733 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256733 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256733 Gene

Proteins for ENSG00000256733 Gene

Post-translational modifications for ENSG00000256733 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256733 Gene

Domains & Families for ENSG00000256733 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256733 Gene

Function for ENSG00000256733 Gene

Phenotypes From GWAS Catalog for ENSG00000256733 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256733 Gene

Localization for ENSG00000256733 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256733 Gene

Pathways & Interactions for ENSG00000256733 Gene

PathCards logo

SuperPathways for ENSG00000256733 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000256733 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000256733 Gene

Drugs & Compounds for ENSG00000256733 Gene

No Compound Related Data Available

Transcripts for ENSG00000256733 Gene

mRNA/cDNA for ENSG00000256733 Gene

4 RNACentral transcripts :
3 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
2 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256733 Gene

No ASD Table

Relevant External Links for ENSG00000256733 Gene

GeneLoc Exon Structure for
ENSG00000256733

Expression for ENSG00000256733 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000256733 Gene

genes like me logo Genes that share expression patterns with ENSG00000256733: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256733 Gene

Orthologs for ENSG00000256733 Gene

Evolution for ENSG00000256733 Gene

ENSEMBL:
Gene Tree for ENSG00000256733 (if available)
TreeFam:
Gene Tree for ENSG00000256733 (if available)

No data available for Orthologs for ENSG00000256733 Gene

Paralogs for ENSG00000256733 Gene

No data available for Paralogs for ENSG00000256733 Gene

Variants for ENSG00000256733 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256733 Gene

Disorders for ENSG00000256733 Gene

No disorders were found for ENSG00000256733 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256733 Gene

Publications for ENSG00000256733 Gene

No publications were found for ENSG00000256733 Gene.

No data available for Mastermind for ENSG00000256733 Gene

Products for ENSG00000256733 Gene

Sources for ENSG00000256733 Gene