Aliases for ENSG00000256706 Gene

Subcategory (RNA class) for ENSG00000256706 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000256706 Gene

  • Novel Transcript 5
  • NONHSAG010179.2 91
  • HSALNG0088571 164
  • Lnc-CACNA1C-1 165
  • AC005342.2 5

External Ids for ENSG00000256706 Gene

Additional External Ids for ENSG00000256706 Gene

Previous GeneCards Identifiers for ENSG00000256706 Gene

  • GC12P002028

Summaries for ENSG00000256706 Gene

GeneCards Summary for ENSG00000256706 Gene

ENSG00000256706 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256706 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256706 Gene

Genomics for ENSG00000256706 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000256706 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J001917 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 600.7 +0.9 854 2.6 IKZF1 ZIC2 NR2C1 HDAC1 EP300 NRF1 CTBP1 ZSCAN29 NR2C2 GABPA CACNA2D4 ENSG00000256706 LRTM2 LOC112268103
GH12J001916 Promoter/Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 600.7 -0.8 -808 0.3 IKZF1 ZNF740 NFIC NR2F2 TBP VEZF1 TCF12 ZNF48 POLR3A GTF3C2 ENSG00000256706 LOC112268103 CACNA2D4 LRTM2
GH12J001658 Promoter/Enhancer 2.3 FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.1 -256.6 -256562 5.3 ARHGAP35 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 REST TFE3 ZNF512 MIR3649 RAD52 ADIPOR2 DCP1B ENSG00000256706 CACNA2D4 LRTM2 CACNA1C MN309425 lnc-FBXL14-2
GH12J001810 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 11.4 -105.9 -105933 4.2 HNRNPL GATAD2A RFX1 IKZF1 NFKBIZ RCOR2 JUND MTA2 RBFOX2 RXRB CACNA2D4 LOC105369601 lnc-DCP1B-4 ENSG00000256706 LRTM2 ADIPOR2
GH12J001668 Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 11.1 -247.6 -247624 3.6 HNRNPL CREB1 GATAD2A PRDM10 REST TFE3 SOX13 NFKBIZ RCOR2 MTA2 lnc-FBXL14-2 CACNA2D4 ENSG00000256706 ADIPOR2 FBXL14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256706 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000256706 Gene

Genomic Locations for ENSG00000256706 Gene
chr12:1,917,848-1,922,868
(GRCh38/hg38)
Size:
5,021 bases
Orientation:
Plus strand
chr12:2,027,117-2,032,033
(GRCh37/hg19)
Size:
4,917 bases
Orientation:
Plus strand

Genomic View for ENSG00000256706 Gene

Genes around ENSG00000256706 on UCSC Golden Path with GeneCards custom track
ENSG00000256706 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000256706 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256706 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256706 Gene

Proteins for ENSG00000256706 Gene

Post-translational modifications for ENSG00000256706 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256706 Gene

Domains & Families for ENSG00000256706 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256706 Gene

Function for ENSG00000256706 Gene

Phenotypes From GWAS Catalog for ENSG00000256706 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256706 Gene

Localization for ENSG00000256706 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256706 Gene

Pathways & Interactions for ENSG00000256706 Gene

PathCards logo

SuperPathways for ENSG00000256706 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000256706 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000256706 Gene

Drugs & Compounds for ENSG00000256706 Gene

No Compound Related Data Available

Transcripts for ENSG00000256706 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000256706 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000531101_9606 lncRNA 315 3

Ensembl: ENST00000544163 (view in UCSC) , ENST00000646059 (view in UCSC) ,

LNCipedia: lnc-CACNA1C-1:1,

NONCODE: NONHSAT025435.2,

URS00009BEAF7_9606 lncRNA 315 2

LncBook: HSALNT0184190,

NONCODE: NONHSAT161728.1,

URS00008BE06F_9606 lncRNA 2492 1

NONCODE: NONHSAT025434.2,

ENSG00000256706 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256706 Gene

No ASD Table

Relevant External Links for ENSG00000256706 Gene

GeneLoc Exon Structure for
ENSG00000256706

No data available for mRNA/cDNA for ENSG00000256706 Gene

Expression for ENSG00000256706 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000256706 Gene

genes like me logo Genes that share expression patterns with ENSG00000256706: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256706 Gene

Orthologs for ENSG00000256706 Gene

Evolution for ENSG00000256706 Gene

ENSEMBL:
Gene Tree for ENSG00000256706 (if available)
TreeFam:
Gene Tree for ENSG00000256706 (if available)

No data available for Orthologs for ENSG00000256706 Gene

Paralogs for ENSG00000256706 Gene

No data available for Paralogs for ENSG00000256706 Gene

Variants for ENSG00000256706 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256706 Gene

Disorders for ENSG00000256706 Gene

No disorders were found for ENSG00000256706 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256706 Gene

Publications for ENSG00000256706 Gene

No publications were found for ENSG00000256706 Gene.

No data available for Mastermind for ENSG00000256706 Gene

Products for ENSG00000256706 Gene

Sources for ENSG00000256706 Gene