ENSG00000256569 Gene (RNA Gene)

 

GC12M120721
GIFtS:
6

Aliases for ENSG00000256569 Gene

Subcategory (RNA class) for ENSG00000256569 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000256569 Gene

  • Novel Transcript, Antisense To UNC119B 5
  • HSALNG0094542 169
  • NONHSAG012530 94
  • Lnc-SPPL3-2 170
  • AC069234.3 5

External Ids for ENSG00000256569 Gene

Previous GeneCards Identifiers for ENSG00000256569 Gene

  • GC12M121159

Summaries for ENSG00000256569 Gene

GeneCards Summary for ENSG00000256569 Gene

ENSG00000256569 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256569 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256569 Gene

Genomics for ENSG00000256569 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256569 Gene

Promoters and enhancers for ENSG00000256569 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J120721 Enhancer 0.6 Ensembl ENCODE dbSUPER 750.6 +1.5 1472 0.5 RCOR1 ENSG00000256569 MIR4700 piR-38949 piR-32711 piR-39430 piR-37130 piR-40038 piR-34193 piR-34329 piR-34332
GH12J120723 Enhancer 0.5 Ensembl dbSUPER 750.6 +0.7 738 0.2 CEBPG CEBPB ENSG00000256569 MIR4700 piR-32711 piR-39430 piR-37130 piR-40038 piR-34193 piR-34329 piR-34332 piR-31875
GH12J120683 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 11.6 +36.2 36191 7.3 E2F8 ZNF24 SP1 ZBTB40 SIX5 ZBTB6 MLX SMARCE1 RBPJ POLR2A MLEC LOC105370029 lnc-SPPL3-4 ACADS GCN1 PXN ANAPC5 RPL31P52 RPLP0 ENSG00000256569
GH12J120533 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 10.2 +186.3 186346 7.1 ZNF24 ZBTB40 SIX5 LCORL SMARCE1 POLR2A NR2F1 NR2F6 HCFC1 RUNX1 RNF10 COQ5 GCN1 RPL31P52 GATC RPLP0 ANAPC5 RAB35 PXN POP5
GH12J120580 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 10.8 +141.1 141138 5.4 ZNF24 SP1 ZBTB40 CTCF RBPJ POLR2A FOS CREB1 MIXL1 RUNX1 POP5 COQ5 GATC RPLP0 GCN1 KDM2B PXN HNF1A-AS1 RPL31P52 MLEC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256569 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256569 Gene

Genomic Locations for ENSG00000256569 Gene
chr12:120,721,507-120,723,639
(GRCh38/hg38)
Size:
2,133 bases
Orientation:
Minus strand
chr12:121,159,310-121,161,442
(GRCh37/hg19)
Size:
2,133 bases
Orientation:
Minus strand

Genomic View for ENSG00000256569 Gene

Genes around ENSG00000256569 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256569 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256569 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000256569 Gene

Proteins for ENSG00000256569 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000256569 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256569 Gene

Domains & Families for ENSG00000256569 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256569 Gene

Function for ENSG00000256569 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000256569 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256569 Gene

Localization for ENSG00000256569 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256569 Gene

Pathways & Interactions for ENSG00000256569 Gene

PathCards logo

SuperPathways for ENSG00000256569 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000256569 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000256569 Gene

Drugs & Compounds for ENSG00000256569 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for ENSG00000256569 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000256569 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(2) RNACentral transcripts :
(2) NONCODE transcripts :
(2) LncBook transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256569 Gene

No ASD Table

Relevant External Links for ENSG00000256569 Gene

GeneLoc Exon Structure for
ENSG00000256569

Expression for ENSG00000256569 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000256569 Gene

mRNA expression in normal human tissues for ENSG00000256569 Gene
mRNA expression by GTEx for ENSG00000256569 Gene
genes like me logo Genes that share expression patterns with ENSG00000256569: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256569 Gene

Orthologs for ENSG00000256569 Gene

Evolution for ENSG00000256569 Gene

ENSEMBL:
Gene Tree for ENSG00000256569 (if available)
TreeFam:
Gene Tree for ENSG00000256569 (if available)

No data available for Orthologs for ENSG00000256569 Gene

Paralogs for ENSG00000256569 Gene

No data available for Paralogs for ENSG00000256569 Gene

Variants for ENSG00000256569 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256569 Gene

Disorders for ENSG00000256569 Gene

No disorders were found for ENSG00000256569 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256569 Gene

Publications for ENSG00000256569 Gene

No publications were found for ENSG00000256569 Gene.

No data available for External Links for ENSG00000256569 Gene

Products for ENSG00000256569 Gene

Sources for ENSG00000256569 Gene