Aliases for ENSG00000256377 Gene

Subcategory (RNA class) for ENSG00000256377 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000256377 Gene

  • Novel Transcript 5
  • HSALNG0090042 167
  • NONHSAG010755 92
  • Lnc-MANSC4-3 168
  • AC009509.1 5

External Ids for ENSG00000256377 Gene

Previous GeneCards Identifiers for ENSG00000256377 Gene

  • GC12M027849

Summaries for ENSG00000256377 Gene

GeneCards Summary for ENSG00000256377 Gene

ENSG00000256377 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256377 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256377 Gene

Genomics for ENSG00000256377 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000256377 Gene

Promoters and enhancers for ENSG00000256377 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J027709 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 541.1 -0.3 -280 3 ZNF217 EP300 ZSCAN5C TCF12 SIN3A MYC NRF1 POLR2G SP1 GTF2E2 ENSG00000256377 MRPS35 MANSC4 C12orf71 KLHL42 MED21 HMGB1P49 piR-35674-097
GH12J027666 Enhancer 0.8 Ensembl ENCODE dbSUPER 23.5 +43.1 43077 1.6 ZNF316 MAFK NFE2 MAFG SOX5 NFE2L2 EMSY ENSG00000256377 lnc-REP15-2 piR-38537-013 PPFIBP1
GH12J028021 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10 -314.2 -314197 7.6 TCF12 JUND FOS KDM6A POLR2A TCF7 FOXA1 ZBTB25 SKI SMARCC2 PTHLH ENSG00000257042 ENSG00000256377 piR-49322-121 lnc-CCDC91-1
GH12J027652 Enhancer 0.8 ENCODE dbSUPER 12.5 +58.5 58450 0.2 CTCF REST RAD21 TRIM22 SMC3 GATA3 IKZF3 ZNF654 RFX5 ZNF2 ENSG00000256377 SMCO2 PPFIBP1 ARNTL2-AS1 piR-38537-013 lnc-REP15-2
GH12J027651 Enhancer 0.8 Ensembl dbSUPER 12.6 +59.1 59102 1 CTCF JUND REST TRIM22 SMC3 RFX5 RAD21 ZNF2 TEAD3 ARID3A ENSG00000256377 SMCO2 PPFIBP1 ARNTL2-AS1 piR-38537-013 lnc-REP15-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256377 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000256377 Gene

Genomic Locations for ENSG00000256377 Gene
chr12:27,696,388-27,710,803
(GRCh38/hg38)
Size:
14,416 bases
Orientation:
Minus strand
chr12:27,849,321-27,863,703
(GRCh37/hg19)
Size:
14,383 bases
Orientation:
Minus strand

Genomic View for ENSG00000256377 Gene

Genes around ENSG00000256377 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000256377 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256377 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256377 Gene

Proteins for ENSG00000256377 Gene

Post-translational modifications for ENSG00000256377 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256377 Gene

Domains & Families for ENSG00000256377 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256377 Gene

Function for ENSG00000256377 Gene

Phenotypes From GWAS Catalog for ENSG00000256377 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256377 Gene

Localization for ENSG00000256377 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256377 Gene

Pathways & Interactions for ENSG00000256377 Gene

PathCards logo

SuperPathways for ENSG00000256377 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000256377 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000256377 Gene

Drugs & Compounds for ENSG00000256377 Gene

No Compound Related Data Available

Transcripts for ENSG00000256377 Gene

mRNA/cDNA for ENSG00000256377 Gene

10 RNACentral transcripts :
4 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
7 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256377 Gene

No ASD Table

Relevant External Links for ENSG00000256377 Gene

GeneLoc Exon Structure for
ENSG00000256377

Expression for ENSG00000256377 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000256377 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000256377 Gene

This gene is overexpressed in Colon - Transverse (x11.7) and Stomach (x7.7).
genes like me logo Genes that share expression patterns with ENSG00000256377: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256377 Gene

Orthologs for ENSG00000256377 Gene

Evolution for ENSG00000256377 Gene

ENSEMBL:
Gene Tree for ENSG00000256377 (if available)
TreeFam:
Gene Tree for ENSG00000256377 (if available)

No data available for Orthologs for ENSG00000256377 Gene

Paralogs for ENSG00000256377 Gene

No data available for Paralogs for ENSG00000256377 Gene

Variants for ENSG00000256377 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256377 Gene

Disorders for ENSG00000256377 Gene

No disorders were found for ENSG00000256377 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256377 Gene

Publications for ENSG00000256377 Gene

No publications were found for ENSG00000256377 Gene.

No data available for Mastermind for ENSG00000256377 Gene

Products for ENSG00000256377 Gene

Sources for ENSG00000256377 Gene