Aliases for ENSG00000256226 Gene

Subcategory (RNA class) for ENSG00000256226 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000256226 Gene

  • Novel Transcript 5
  • NONHSAG010740.2 91
  • Lnc-C12orf71-1 165
  • AC092747.1 5

External Ids for ENSG00000256226 Gene

Previous GeneCards Identifiers for ENSG00000256226 Gene

  • GC12M027258

Summaries for ENSG00000256226 Gene

GeneCards Summary for ENSG00000256226 Gene

ENSG00000256226 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000256226 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000256226 Gene

Genomics for ENSG00000256226 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000256226 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J027161 Enhancer 1 Ensembl ENCODE dbSUPER 600.7 -1.3 -1266 2.7 TEAD4 STAT3 POLR2A PKNOX1 SIN3A RUNX3 ESRRA ELF1 NR2F1 BATF ENSG00000256226 MED21 ENSG00000247903 TM7SF3 piR-43463 C12orf71 STK38L
GH12J027176 Enhancer 1.4 FANTOM5 ENCODE dbSUPER 0.4 -17.7 -17702 5.3 CREB1 ATF7 PRDM10 ZNF629 STAT3 JUND PRDM1 RELA IKZF2 TRIM22 STK38L MED21 ENSG00000247903 C12orf71 piR-43463 ENSG00000256226
GH12J027158 Enhancer 0.6 Ensembl ENCODE 0.7 +3.0 2992 1.6 TCF7 EZH2 FOXA2 MED21 ENSG00000256226 lnc-MED21-5 C12orf71 STK38L
GH12J027185 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 -25.0 -25008 2.8 SP1 BACH1 RELA IKZF2 TRIM22 PKNOX1 SCRT2 EED ARID3A DPF2 piR-43463 STK38L MED21 TM7SF3 ENSG00000247903 ENSG00000256226 C12orf71
GH12J027142 Enhancer 0.7 ENCODE 0.4 +19.1 19090 0.2 CTCF IKZF1 PRDM1 REST RAD21 IKZF2 TRIM22 EED SMC3 YY1 MED21 ENSG00000256226 ENSG00000256625 lnc-MED21-5 C12orf71 STK38L
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000256226 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000256226 Gene

Genomic Locations for ENSG00000256226 Gene
chr12:27,105,151-27,161,393
(GRCh38/hg38)
Size:
56,243 bases
Orientation:
Minus strand
chr12:27,258,084-27,314,326
(GRCh37/hg19)
Size:
56,243 bases
Orientation:
Minus strand

Genomic View for ENSG00000256226 Gene

Genes around ENSG00000256226 on UCSC Golden Path with GeneCards custom track
ENSG00000256226 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000256226 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000256226 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000256226 Gene

Proteins for ENSG00000256226 Gene

Post-translational modifications for ENSG00000256226 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000256226 Gene

Domains & Families for ENSG00000256226 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000256226 Gene

Function for ENSG00000256226 Gene

Phenotypes From GWAS Catalog for ENSG00000256226 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000256226 Gene

Localization for ENSG00000256226 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000256226 Gene

Pathways & Interactions for ENSG00000256226 Gene

PathCards logo

SuperPathways for ENSG00000256226 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000256226 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000256226 Gene

Drugs & Compounds for ENSG00000256226 Gene

No Compound Related Data Available

Transcripts for ENSG00000256226 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000256226 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00000E8CB6_9606 lncRNA 380 3

Ensembl: ENST00000540595 (view in UCSC) ,

LNCipedia: lnc-C12orf71-1:2,

NONCODE: NONHSAT027426.2,

URS00005900D5_9606 lncRNA 351 3

Ensembl: ENST00000538920 (view in UCSC) ,

LNCipedia: lnc-C12orf71-1:1,

NONCODE: NONHSAT027422.2,

URS00008B3990_9606 lncRNA 415 2

LNCipedia: lnc-C12orf71-1:3,

NONCODE: NONHSAT027425.2,

ENSG00000256226 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000256226 Gene

No ASD Table

Relevant External Links for ENSG00000256226 Gene

GeneLoc Exon Structure for
ENSG00000256226

No data available for mRNA/cDNA for ENSG00000256226 Gene

Expression for ENSG00000256226 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000256226 Gene

genes like me logo Genes that share expression patterns with ENSG00000256226: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000256226 Gene

Orthologs for ENSG00000256226 Gene

Evolution for ENSG00000256226 Gene

ENSEMBL:
Gene Tree for ENSG00000256226 (if available)
TreeFam:
Gene Tree for ENSG00000256226 (if available)

No data available for Orthologs for ENSG00000256226 Gene

Paralogs for ENSG00000256226 Gene

No data available for Paralogs for ENSG00000256226 Gene

Variants for ENSG00000256226 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000256226 Gene

Disorders for ENSG00000256226 Gene

No disorders were found for ENSG00000256226 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000256226 Gene

Publications for ENSG00000256226 Gene

No publications were found for ENSG00000256226 Gene.

No data available for Mastermind for ENSG00000256226 Gene

Products for ENSG00000256226 Gene

Sources for ENSG00000256226 Gene