Aliases for ENSG00000255686 Gene

Subcategory (RNA class) for ENSG00000255686 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000255686 Gene

  • Novel Transcript 5
  • NONHSAG012447.2 91
  • HSALNG0094388 164
  • Lnc-FBXW8-2 165
  • AC073864.1 5

External Ids for ENSG00000255686 Gene

Previous GeneCards Identifiers for ENSG00000255686 Gene

  • GC12P117890

Summaries for ENSG00000255686 Gene

GeneCards Summary for ENSG00000255686 Gene

ENSG00000255686 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000255686 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000255686 Gene

Genomics for ENSG00000255686 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000255686 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J117485 Enhancer 0.9 Ensembl ENCODE 11.6 +33.9 33879 2.2 ZBTB33 KDM1A REST ZNF600 ZNF341 CEBPB SP1 ZNF10 SMARCA5 CTBP1 NOS1 ENSG00000255686 LOC105370012 lnc-NOS1-2 KSR2
GH12J117407 Enhancer 0.9 Ensembl ENCODE CraniofacialAtlas 11.4 -44.7 -44711 1.4 SP1 YY1 GABPA ZFHX2 RAD21 HNF4A ZFX EGR2 NOS1 ENSG00000255686 lnc-KSR2-1 lnc-NOS1-1 lnc-KSR2-2 FBXO21
GH12J117494 Enhancer 0.9 Ensembl 11.3 +42.4 42401 1.2 PRDM10 ZNF629 REST KDM1A ZNF692 FOXA1 SP1 ZNF501 SCRT2 ZBTB44 NOS1 ENSG00000255686 LOC105370012 lnc-NOS1-2 KSR2
GH12J117501 Enhancer 0.8 Ensembl ENCODE 11.6 +48.8 48789 2.8 SP1 CEBPA MNT CEBPB FOXA2 ATF3 YY1 ZBTB33 JUND RAD21 ENSG00000255686 NOS1 LOC105370012 lnc-NOS1-2 KSR2
GH12J117579 Enhancer 0.9 FANTOM5 Ensembl ENCODE 10.5 +128.3 128285 2.6 KLF9 SP2 GLIS1 KLF10 SP1 SP3 KLF1 HLF NOS1 ENSG00000255686 hsa-miR-1273e-017 piR-50357-047 KSR2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000255686 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000255686 Gene

Genomic Locations for ENSG00000255686 Gene
chr12:117,453,012-117,456,987
(GRCh38/hg38)
Size:
3,976 bases
Orientation:
Plus strand
chr12:117,890,817-117,894,791
(GRCh37/hg19)
Size:
3,975 bases
Orientation:
Plus strand

Genomic View for ENSG00000255686 Gene

Genes around ENSG00000255686 on UCSC Golden Path with GeneCards custom track
ENSG00000255686 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000255686 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255686 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255686 Gene

Proteins for ENSG00000255686 Gene

Post-translational modifications for ENSG00000255686 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255686 Gene

Domains & Families for ENSG00000255686 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000255686 Gene

Function for ENSG00000255686 Gene

Phenotypes From GWAS Catalog for ENSG00000255686 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255686 Gene

Localization for ENSG00000255686 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255686 Gene

Pathways & Interactions for ENSG00000255686 Gene

PathCards logo

SuperPathways for ENSG00000255686 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000255686 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000255686 Gene

Drugs & Compounds for ENSG00000255686 Gene

No Compound Related Data Available

Transcripts for ENSG00000255686 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000255686 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000042FD16_9606 lncRNA 562 4

Ensembl: ENST00000540161 (view in UCSC) ,

LncBook: HSALNT0195694,

LNCipedia: lnc-FBXW8-2:1,

NONCODE: NONHSAT031007.2,

URS00009B9517_9606 lncRNA 562 2

LncBook: HSALNT0195695,

NONCODE: NONHSAT162831.1,

URS00008B3B2B_9606 lncRNA 391 1

LNCipedia: lnc-FBXW8-2:2,

ENSG00000255686 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255686 Gene

No ASD Table

Relevant External Links for ENSG00000255686 Gene

GeneLoc Exon Structure for
ENSG00000255686

No data available for mRNA/cDNA for ENSG00000255686 Gene

Expression for ENSG00000255686 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000255686 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000255686 Gene

This gene is overexpressed in Pituitary (x7.6), Brain - Hippocampus (x5.1), Brain - Cortex (x4.4), and Brain - Frontal Cortex (BA9) (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000255686: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255686 Gene

Orthologs for ENSG00000255686 Gene

Evolution for ENSG00000255686 Gene

ENSEMBL:
Gene Tree for ENSG00000255686 (if available)
TreeFam:
Gene Tree for ENSG00000255686 (if available)

No data available for Orthologs for ENSG00000255686 Gene

Paralogs for ENSG00000255686 Gene

No data available for Paralogs for ENSG00000255686 Gene

Variants for ENSG00000255686 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255686 Gene

Disorders for ENSG00000255686 Gene

No disorders were found for ENSG00000255686 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000255686 Gene

Publications for ENSG00000255686 Gene

No publications were found for ENSG00000255686 Gene.

No data available for Mastermind for ENSG00000255686 Gene

Products for ENSG00000255686 Gene

Sources for ENSG00000255686 Gene