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Aliases for ENSG00000255542 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000255542 Gene

  • AC090625.2 5

External Ids for ENSG00000255542 Gene

Summaries for ENSG00000255542 Gene

GeneCards Summary for ENSG00000255542 Gene

ENSG00000255542 is an RNA Gene.

Additional gene information for ENSG00000255542 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000255542 Gene

Genomics for ENSG00000255542 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000255542 Gene

Promoters and enhancers for ENSG00000255542 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J035418 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 650.7 +0.5 508 1.5 CTCF MXI1 SUZ12 MZF1 ZIC2 ZNF335 E2F1 ZFHX2 GLIS2 POLR2A SLC1A2 ENSG00000255542
GH11J035389 Enhancer 1.4 Ensembl ENCODE dbSUPER 11.8 -27.8 -27835 3.5 PKNOX1 CLOCK FOXA2 MLX ARID4B NEUROD1 SIN3A FEZF1 IRF4 YY1 SLC1A2 APIP ENSG00000255542 PDHX MIR1343 ENSG00000215380 GC11P035411
GH11J035387 Enhancer 1 FANTOM5 ENCODE dbSUPER 11.8 -31.3 -31252 1 CTCF JUND RFX1 RFX3 FOS BMI1 RAD21 SLC1A2 ENSG00000255542 PDHX APIP MIR1343 CD44 ENSG00000215380 GC11P035411
GH11J035321 Enhancer 1 Ensembl ENCODE dbSUPER 9.6 -96.5 -96542 2.7 NCOA3 LEF1 MZF1 CBFA2T3 CEBPG FOSL1 ZNF217 GATA3 SCRT2 VEZF1 ENSG00000255004 SLC1A2 MIR1343 ENSG00000255542 ENSG00000215380
GH11J035379 Enhancer 0.6 dbSUPER 10.7 -38.0 -38048 3.1 IRF9 STAT1 ADNP SCRT2 STAT3 ZMYM3 CEBPG KDM1A SLC1A2 ENSG00000255004 ENSG00000255542 APIP PDHX MIR1343 ENSG00000215380 GC11P035411
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000255542 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000255542 Gene

Genomic Locations for ENSG00000255542 Gene
chr11:35,419,057-35,421,002
(GRCh38/hg38)
Size:
1,946 bases
Orientation:
Plus strand
chr11:35,440,604-35,442,549
(GRCh37/hg19)
Size:
1,946 bases
Orientation:
Plus strand

Genomic View for ENSG00000255542 Gene

Genes around ENSG00000255542 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000255542 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255542 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255542 Gene

Proteins for ENSG00000255542 Gene

Post-translational modifications for ENSG00000255542 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255542 Gene

Domains & Families for ENSG00000255542 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000255542 Gene

Function for ENSG00000255542 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255542 Gene

Localization for ENSG00000255542 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255542 Gene

Pathways & Interactions for ENSG00000255542 Gene

SuperPathways for ENSG00000255542 Gene

No Data Available

Interacting Proteins for ENSG00000255542 Gene

Gene Ontology (GO) - Biological Process for ENSG00000255542 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000255542 Gene

Drugs & Compounds for ENSG00000255542 Gene

No Compound Related Data Available

Transcripts for ENSG00000255542 Gene

mRNA/cDNA for ENSG00000255542 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255542 Gene

No ASD Table

Relevant External Links for ENSG00000255542 Gene

GeneLoc Exon Structure for
ENSG00000255542

Expression for ENSG00000255542 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000255542 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000255542 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x5.7), Brain - Nucleus accumbens (basal ganglia) (x5.6), Brain - Caudate (basal ganglia) (x5.6), Brain - Amygdala (x5.1), and Brain - Hippocampus (x4.7).
genes like me logo Genes that share expression patterns with ENSG00000255542: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255542 Gene

Orthologs for ENSG00000255542 Gene

Evolution for ENSG00000255542 Gene

ENSEMBL:
Gene Tree for ENSG00000255542 (if available)
TreeFam:
Gene Tree for ENSG00000255542 (if available)

No data available for Orthologs for ENSG00000255542 Gene

Paralogs for ENSG00000255542 Gene

No data available for Paralogs for ENSG00000255542 Gene

Variants for ENSG00000255542 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255542 Gene

Disorders for ENSG00000255542 Gene

No disorders were found for ENSG00000255542 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000255542 Gene

Publications for ENSG00000255542 Gene

No publications were found for ENSG00000255542 Gene.

Products for ENSG00000255542 Gene

Sources for ENSG00000255542 Gene

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