Aliases for ENSG00000255410 Gene

Subcategory (RNA class) for ENSG00000255410 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000255410 Gene

  • Novel Transcript 5
  • NONHSAG007545.2 91
  • HSALNG0082461 164
  • AC091564.5 5
  • Lnc-ILK-4 165

External Ids for ENSG00000255410 Gene

Summaries for ENSG00000255410 Gene

GeneCards Summary for ENSG00000255410 Gene

ENSG00000255410 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000255410 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000255410 Gene

Genomics for ENSG00000255410 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000255410 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J006630 Promoter/Enhancer 0.9 Ensembl CraniofacialAtlas 600.7 -0.1 -118 0.8 EZH2 USF1 REST ZBTB33 ZFX NRF1 GTF2F1 POLR2A ENSG00000255410 DCHS1 piR-47472 TPP1
GH11J006598 Enhancer 1 Ensembl ENCODE dbSUPER 10.3 -31.2 -31220 2.6 REST SP1 CEBPA YY1 GABPA ZBTB33 JUND NFIC SAP130 RAD21 piR-49128 RRP8 MRPL17 RPL21P94 ENSG00000255410 piR-60037 DNHD1
GH11J006531 Enhancer 0.8 ENCODE 10.6 -99.0 -99048 0.2 CTCF TEAD4 MTA2 ZNF143 MTA1 REST RAD21 BRD9 ZNF24 TRIM22 RRP8 ILK MRPL17 RPL21P94 ENSG00000254641 TAF10 ENSG00000255410 ARFIP2 TIMM10B APBB1
GH11J006596 Enhancer 0.4 Ensembl 10.3 -33.9 -33903 1.2 POLR2A SMARCA4 ESRRA EZH2 piR-49128 RRP8 MRPL17 RPL21P94 ENSG00000255410 lnc-RRP8-5 DNHD1
GH11J006654 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas 0.4 +24.3 24266 5.2 ZNF512 SOX13 IKZF1 KDM1A MTA2 PRDM1 POLR2A RXRB NR2C1 EZH2 DCHS1 RRP8 ENSG00000254641 ILK FAM160A2 MRPL17 RPL21P94 ENSG00000254400 ENSG00000251364 TAF10
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000255410 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000255410 Gene

Genomic Locations for ENSG00000255410 Gene
chr11:6,630,504-6,663,858
(GRCh38/hg38)
Size:
33,355 bases
Orientation:
Plus strand
chr11:6,651,834-6,656,439
(GRCh37/hg19)
Size:
4,606 bases
Orientation:
Plus strand

Genomic View for ENSG00000255410 Gene

Genes around ENSG00000255410 on UCSC Golden Path with GeneCards custom track
ENSG00000255410 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000255410 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255410 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255410 Gene

Proteins for ENSG00000255410 Gene

Post-translational modifications for ENSG00000255410 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255410 Gene

Domains & Families for ENSG00000255410 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000255410 Gene

Function for ENSG00000255410 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255410 Gene

Localization for ENSG00000255410 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255410 Gene

Pathways & Interactions for ENSG00000255410 Gene

PathCards logo

SuperPathways for ENSG00000255410 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000255410 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000255410 Gene

Drugs & Compounds for ENSG00000255410 Gene

No Compound Related Data Available

Transcripts for ENSG00000255410 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000255410 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000211446_9606 lncRNA 487 2

Ensembl: ENST00000526633 (view in UCSC) ,

NONCODE: NONHSAT017753.2,

URS0000EF4207_9606 lncRNA 1799 1

Ensembl: ENST00000656961 (view in UCSC) ,

URS0000D5A540_9606 lncRNA 2111 2

LncBook: HSALNT0171571,

LNCipedia: lnc-ILK-4:4,

URS0000D5B705_9606 lncRNA 1455 2

LncBook: HSALNT0171572,

LNCipedia: lnc-ILK-4:2,

URS00008B26E2_9606 lncRNA 380 2

LNCipedia: lnc-ILK-4:1,

NONCODE: NONHSAT017754.2,

ENSG00000255410 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255410 Gene

No ASD Table

Relevant External Links for ENSG00000255410 Gene

GeneLoc Exon Structure for
ENSG00000255410

No data available for mRNA/cDNA for ENSG00000255410 Gene

Expression for ENSG00000255410 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000255410 Gene

genes like me logo Genes that share expression patterns with ENSG00000255410: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255410 Gene

Orthologs for ENSG00000255410 Gene

Evolution for ENSG00000255410 Gene

ENSEMBL:
Gene Tree for ENSG00000255410 (if available)
TreeFam:
Gene Tree for ENSG00000255410 (if available)

No data available for Orthologs for ENSG00000255410 Gene

Paralogs for ENSG00000255410 Gene

No data available for Paralogs for ENSG00000255410 Gene

Variants for ENSG00000255410 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255410 Gene

Disorders for ENSG00000255410 Gene

No disorders were found for ENSG00000255410 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000255410 Gene

Publications for ENSG00000255410 Gene

No publications were found for ENSG00000255410 Gene.

No data available for Mastermind for ENSG00000255410 Gene

Products for ENSG00000255410 Gene

Sources for ENSG00000255410 Gene