Aliases for ENSG00000255404 Gene

Subcategory (RNA class) for ENSG00000255404 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000255404 Gene

  • Novel Transcript 5
  • NONHSAG008702 94
  • HSALNG0084948 169
  • Lnc-AP5B1-2 170
  • AP001266.1 5

External Ids for ENSG00000255404 Gene

Previous GeneCards Identifiers for ENSG00000255404 Gene

  • GC11M065563

Summaries for ENSG00000255404 Gene

GeneCards Summary for ENSG00000255404 Gene

ENSG00000255404 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000255404 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000255404 Gene

Genomics for ENSG00000255404 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000255404 Gene

Promoters and enhancers for ENSG00000255404 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J065797 Enhancer 0.3 Ensembl dbSUPER 750.6 -1.7 -1682 0.6 ENSG00000255404 RF00017-948
GH11J065800 Enhancer 0.3 Ensembl dbSUPER 750.6 -0.7 -682 0.2 ENSG00000255404 RF00017-948
GH11J065799 Enhancer 0.3 Ensembl dbSUPER 750.6 -0.3 -282 0.2 ENSG00000255404 piR-36419 piR-38264 SNX32 SSSCA1-AS1 RF00017-948
GH11J065798 Enhancer 0.2 Ensembl 750.6 +0.1 118 0.2 ENSG00000255404 piR-36419 piR-38264 OVOL1
GH11J065819 Enhancer 1 Ensembl ENCODE dbSUPER 11.7 -24.9 -24942 5.5 CTCF MLX ELF3 SP1 TFE3 CEBPA GATAD2A ZSCAN4 IRF2 SAP130 CTSW MUS81 CFL1 OVOL1-AS1 OVOL1 AP5B1 ENSG00000255404 SART1 SNX32 EFEMP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000255404 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000255404 Gene

Genomic Locations for ENSG00000255404 Gene
chr11:65,795,946-65,797,219
(GRCh38/hg38)
Size:
1,274 bases
Orientation:
Minus strand
chr11:65,563,417-65,564,690
(GRCh37/hg19)
Size:
1,274 bases
Orientation:
Minus strand

Genomic View for ENSG00000255404 Gene

Genes around ENSG00000255404 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000255404 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255404 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255404 Gene

Proteins for ENSG00000255404 Gene

Post-translational modifications for ENSG00000255404 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255404 Gene

Domains & Families for ENSG00000255404 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000255404 Gene

Function for ENSG00000255404 Gene

Phenotypes From GWAS Catalog for ENSG00000255404 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255404 Gene

Localization for ENSG00000255404 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255404 Gene

Pathways & Interactions for ENSG00000255404 Gene

PathCards logo

SuperPathways for ENSG00000255404 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000255404 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000255404 Gene

Drugs & Compounds for ENSG00000255404 Gene

No Compound Related Data Available

Transcripts for ENSG00000255404 Gene

mRNA/cDNA for ENSG00000255404 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255404 Gene

No ASD Table

Relevant External Links for ENSG00000255404 Gene

GeneLoc Exon Structure for
ENSG00000255404

Expression for ENSG00000255404 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000255404 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000255404 Gene

This gene is overexpressed in Esophagus - Mucosa (x11.3), Skin - Not Sun Exposed (Suprapubic) (x11.3), and Skin - Sun Exposed (Lower leg) (x8.8).
genes like me logo Genes that share expression patterns with ENSG00000255404: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255404 Gene

Orthologs for ENSG00000255404 Gene

Evolution for ENSG00000255404 Gene

ENSEMBL:
Gene Tree for ENSG00000255404 (if available)
TreeFam:
Gene Tree for ENSG00000255404 (if available)

No data available for Orthologs for ENSG00000255404 Gene

Paralogs for ENSG00000255404 Gene

No data available for Paralogs for ENSG00000255404 Gene

Variants for ENSG00000255404 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255404 Gene

Disorders for ENSG00000255404 Gene

No disorders were found for ENSG00000255404 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000255404 Gene

Publications for ENSG00000255404 Gene

No publications were found for ENSG00000255404 Gene.

No data available for External Links for ENSG00000255404 Gene

Products for ENSG00000255404 Gene

Sources for ENSG00000255404 Gene