Aliases for ENSG00000255219 Gene

Subcategory (RNA class) for ENSG00000255219 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000255219 Gene

  • Novel Transcript 5
  • Lnc-UBASH3B-2 170
  • HSALNG0087773 169
  • HSALNG0087775 169
  • NONHSAG009880 94
  • AP000755.2 5

External Ids for ENSG00000255219 Gene

Previous GeneCards Identifiers for ENSG00000255219 Gene

  • GC11P122165

Summaries for ENSG00000255219 Gene

GeneCards Summary for ENSG00000255219 Gene

ENSG00000255219 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000255219 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000255219 Gene

Genomics for ENSG00000255219 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000255219 Gene

Promoters and enhancers for ENSG00000255219 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J122365 Promoter/Enhancer 1.6 Ensembl ENCODE CraniofacialAtlas 10.4 +71.4 71409 4.2 FOXA1 POLR2A MIXL1 HLF RAD21 ELF3 SP1 RXRA GATAD2A RXRB ENSG00000255219 lnc-UBASH3B-1 ENSG00000255015 MIR100HG
GH11J122174 Promoter/Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 10.2 -116.4 -116396 8.4 SIN3A MAFK POLR2A NFE2L2 CEBPB REST ZNF316 NFE2 ATF3 SCRT2 BLID MIR100HG ENSG00000255219 lnc-UBASH3B-2 LN871060
GH11J122185 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 10.3 -102.9 -102905 13.4 POLR2A ZBTB33 SP1 MAFK NFE2L2 CEBPB REST CHD2 JUN JUND MIRLET7A2 BLID MIR100HG ENSG00000255219 piR-41306-051 lnc-UBASH3B-5 lnc-UBASH3B-6 lnc-UBASH3B-2
GH11J122228 Enhancer 1.2 FANTOM5 ENCODE CraniofacialAtlas dbSUPER 10.2 -65.5 -65520 1.9 NR2F6 CREB1 SP1 RXRB SOX13 TCF7 SAP130 FOXA2 TEAD1 SMAD4 ENSG00000255219 ENSG00000255015 lnc-UBASH3B-4 MIR100HG
GH11J122316 Enhancer 0.9 FANTOM5 Ensembl ENCODE CraniofacialAtlas 11.2 +24.7 24711 6.6 POLR2A ATF2 ENSG00000255015 ENSG00000255219 lnc-UBASH3B-1 MIR100HG
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000255219 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000255219 Gene

Genomic Locations for ENSG00000255219 Gene
chr11:122,295,190-122,308,019
(GRCh38/hg38)
Size:
12,830 bases
Orientation:
Plus strand
chr11:122,165,898-122,178,727
(GRCh37/hg19)
Size:
12,830 bases
Orientation:
Plus strand

Genomic View for ENSG00000255219 Gene

Genes around ENSG00000255219 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000255219 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255219 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255219 Gene

Proteins for ENSG00000255219 Gene

Post-translational modifications for ENSG00000255219 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255219 Gene

Domains & Families for ENSG00000255219 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000255219 Gene

Function for ENSG00000255219 Gene

Phenotypes From GWAS Catalog for ENSG00000255219 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255219 Gene

Localization for ENSG00000255219 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255219 Gene

Pathways & Interactions for ENSG00000255219 Gene

PathCards logo

SuperPathways for ENSG00000255219 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000255219 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000255219 Gene

Drugs & Compounds for ENSG00000255219 Gene

No Compound Related Data Available

Transcripts for ENSG00000255219 Gene

mRNA/cDNA for ENSG00000255219 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(5) RNACentral transcripts :
(5) NONCODE transcripts :
(3) LncBook transcripts :
(4) LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255219 Gene

No ASD Table

Relevant External Links for ENSG00000255219 Gene

GeneLoc Exon Structure for
ENSG00000255219

Expression for ENSG00000255219 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000255219 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000255219 Gene

This gene is overexpressed in Brain - Spinal cord (cervical c-1) (x6.9), Brain - Substantia nigra (x6.0), and Brain - Hippocampus (x5.7).
genes like me logo Genes that share expression patterns with ENSG00000255219: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255219 Gene

Orthologs for ENSG00000255219 Gene

Evolution for ENSG00000255219 Gene

ENSEMBL:
Gene Tree for ENSG00000255219 (if available)
TreeFam:
Gene Tree for ENSG00000255219 (if available)

No data available for Orthologs for ENSG00000255219 Gene

Paralogs for ENSG00000255219 Gene

No data available for Paralogs for ENSG00000255219 Gene

Variants for ENSG00000255219 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255219 Gene

Disorders for ENSG00000255219 Gene

No disorders were found for ENSG00000255219 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000255219 Gene

Publications for ENSG00000255219 Gene

No publications were found for ENSG00000255219 Gene.

No data available for External Links for ENSG00000255219 Gene

Products for ENSG00000255219 Gene

Sources for ENSG00000255219 Gene