Aliases for ENSG00000255031 Gene

Data sources for ENSG00000255031 Gene:

RNA type for ENSG00000255031 Gene

lncRNA

Aliases for ENSG00000255031 Gene

External Ids for ENSG00000255031 Gene

Previous GeneCards Identifiers for ENSG00000255031 Gene

  • GC11P067818

Summaries for ENSG00000255031 Gene

GeneCards Summary for ENSG00000255031 Gene

ENSG00000255031 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000255031 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000255031 Gene

Genomics for ENSG00000255031 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000255031 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J068049 Promoter/Enhancer 0.7 EPDnew dbSUPER 250.7 -0.3 -342 0.1 ZIC2 GLIS1 POLR2A ENSG00000255031 NONHSAG008840.2 TCIRG1 CHKA
GH11J068051 Enhancer 0.6 ENCODE dbSUPER 250.7 +1.3 1285 1 POLR2A RBM22 FOSL2 HNRNPL ENSG00000255031 ANKRD13D HSALNG0085214 TCIRG1 CHKA
GH11J068050 Enhancer 0.4 dbSUPER 250.7 -0.1 -113 0.3 REST ZBTB33 GLIS1 ENSG00000255031 NONHSAG008840.2 TCIRG1 CHKA
GH11J068114 Promoter/Enhancer 2.4 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 15.6 +69.2 69224 9.2 BCLAF1 SP1 ZNF207 ZNF600 MYC ZNF580 ZNF592 KLF9 CEBPA POLR2A CHKA-DT CHKA HSALNG0085219 KMT5B ENSG00000255031 ANKRD13D NDUFS8 TCIRG1 ACY3 HSALNG0085217
GH11J068035 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 16.9 -10.5 -10478 9.2 NCOR1 MYC IKZF1 ZNF592 ZMYM3 POLR2A ATF3 ZIC2 NFIC CHD4 TCIRG1 NONHSAG008838.2 ENSG00000255031 CHKA-DT ENSG00000255306 OR7E11P HSALNG0085211 MN309386 lnc-CHKA-3 NDUFS8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000255031 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000255031 Gene

Latest Assembly
chr11:68,050,284-68,053,762
(GRCh38/hg38)
Size:
3,479 bases
Orientation:
Plus strand

Previous Assembly
chr11:67,818,207-67,821,229
(GRCh37/hg19 by Ensembl)
Size:
3,023 bases
Orientation:
Plus strand

Genomic View for ENSG00000255031 Gene

Genes around ENSG00000255031 on UCSC Golden Path with GeneCards custom track
ENSG00000255031 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000255031 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000255031 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000255031 Gene

Proteins for ENSG00000255031 Gene

Post-translational modifications for ENSG00000255031 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000255031 Gene

Domains & Families for ENSG00000255031 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000255031 Gene

Function for ENSG00000255031 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000255031 Gene

Localization for ENSG00000255031 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000255031 Gene

Pathways & Interactions for ENSG00000255031 Gene

PathCards logo

SuperPathways for ENSG00000255031 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000255031 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000255031 Gene

Drugs & Compounds for ENSG00000255031 Gene

No Compound Related Data Available

Transcripts for ENSG00000255031 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000255031 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00001F38D7_9606 lncRNA 791 3

Ensembl: ENST00000526897 (view in UCSC) ,

LncBook: HSALNT0177327,

LNCipedia: lnc-TCIRG1-1:2,

URS000057CD56_9606 lncRNA 664 3

Ensembl: ENST00000534517 (view in UCSC) ,

LncBook: HSALNT0177329,

LNCipedia: lnc-TCIRG1-1:3,

URS00003566C0_9606 lncRNA 326 2

Ensembl: ENST00000529934 (view in UCSC) ,

LncBook: HSALNT0177325,

URS00008BC6FC_9606 lncRNA 2130 1

LNCipedia: lnc-TCIRG1-1:6,

URS0001BF571E_9606 lncRNA 221 1

LncBook: HSALNT0177323,

ENSG00000255031 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000255031 Gene

No ASD Table

Relevant External Links for ENSG00000255031 Gene

GeneLoc Exon Structure for
ENSG00000255031

No data available for mRNA/cDNA for ENSG00000255031 Gene

Expression for ENSG00000255031 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000255031 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000255031 Gene

This gene is overexpressed in Whole Blood (x6.6).
genes like me logo Genes that share expression patterns with ENSG00000255031: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000255031 Gene

Orthologs for ENSG00000255031 Gene

Evolution for ENSG00000255031 Gene

ENSEMBL:
Gene Tree for ENSG00000255031 (if available)
TreeFam:
Gene Tree for ENSG00000255031 (if available)

No data available for Orthologs for ENSG00000255031 Gene

Paralogs for ENSG00000255031 Gene

No data available for Paralogs for ENSG00000255031 Gene

Variants for ENSG00000255031 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000255031 Gene

Disorders for ENSG00000255031 Gene

Additional Disease Information for ENSG00000255031

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000255031 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000255031 Gene

Publications for ENSG00000255031 Gene

No publications were found for ENSG00000255031 Gene.

No data available for Mastermind for ENSG00000255031 Gene

Products for ENSG00000255031 Gene

Sources for ENSG00000255031 Gene