Aliases for ENSG00000254964 Gene

Data sources for ENSG00000254964 Gene:

Subcategory (RNA class) for ENSG00000254964 Gene

lncRNA

Aliases for ENSG00000254964 Gene

External Ids for ENSG00000254964 Gene

Previous GeneCards Identifiers for ENSG00000254964 Gene

  • GC11P062373

Summaries for ENSG00000254964 Gene

GeneCards Summary for ENSG00000254964 Gene

ENSG00000254964 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000254964 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000254964 Gene

Genomics for ENSG00000254964 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000254964 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J062604 Enhancer 0.7 ENCODE CraniofacialAtlas 250.7 +1.9 1883 0.6 IKZF1 ZBTB48 ZBTB33 ZNF561 PRDM10 WT1 PRDM1 ENSG00000254964 HSALNG0084621 HSALNG0084624 MTA2 lnc-MTA2-2 EML3 ROM1
GH11J062605 Enhancer 0.3 ENCODE 250.7 +1.3 1275 0.1 RFX1 ENSG00000254964 HSALNG0084621 HSALNG0084624 MTA2 EML3 ROM1
GH11J062537 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.4 -52.2 -52163 25.7 CHD2 TBP SP1 ZBTB10 MXD4 BCL11A FEZF1 CEBPA MNT DEK AHNAK lnc-ROM1-6 piR-46432-002 EML3 MTA2 NXF1 TUT1 LOC105369332 STX5 WDR74
GH11J062712 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE dbSUPER 10.5 +111.1 111139 3.8 RXRA FOXA2 ZBTB33 RBM22 ZNF316 FOSL1 JUND HNF4A FOXA1 NFE2 HSALNG0084643 piR-45619 HNRNPUL2 TTC9C UBXN1 LBHD1 LRRN4CL POLR2G GANAB UQCC3
GH11J062380 Enhancer 1.1 Ensembl ENCODE CraniofacialAtlas 9.9 -221.2 -221171 2.5 FEZF1 ZNF217 CTCF REST CUX1 TRIM22 RAD21 RARA RFX5 ZNF843 piR-36887-008 ASRGL1 ENSG00000255126 SCGB1A1 ENSG00000255446 AHNAK EML3 ENSG00000255508 TUT1 ENSG00000254964
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000254964 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000254964 Gene

Latest Assembly
chr11:62,602,946-62,606,551
(GRCh38/hg38)
Size:
3,606 bases
Orientation:
Plus strand

Previous Assembly
chr11:62,373,633-62,373,877
(GRCh37/hg19 by Ensembl)
Size:
245 bases
Orientation:
Plus strand

Genomic View for ENSG00000254964 Gene

Genes around ENSG00000254964 on UCSC Golden Path with GeneCards custom track
ENSG00000254964 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000254964 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254964 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254964 Gene

Proteins for ENSG00000254964 Gene

Post-translational modifications for ENSG00000254964 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254964 Gene

Domains & Families for ENSG00000254964 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000254964 Gene

Function for ENSG00000254964 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254964 Gene

Localization for ENSG00000254964 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254964 Gene

Pathways & Interactions for ENSG00000254964 Gene

PathCards logo

SuperPathways for ENSG00000254964 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000254964 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000254964 Gene

Drugs & Compounds for ENSG00000254964 Gene

No Compound Related Data Available

Transcripts for ENSG00000254964 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000254964 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00004668B6_9606 lncRNA 92 1

Ensembl: ENST00000532626 (view in UCSC) ,

URS0001BCEFAE_9606 lncRNA 221 1

LncBook: HSALNT0176241,

ENSG00000254964 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254964 Gene

No ASD Table

Relevant External Links for ENSG00000254964 Gene

GeneLoc Exon Structure for
ENSG00000254964

No data available for mRNA/cDNA for ENSG00000254964 Gene

Expression for ENSG00000254964 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000254964 Gene

genes like me logo Genes that share expression patterns with ENSG00000254964: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254964 Gene

Orthologs for ENSG00000254964 Gene

Evolution for ENSG00000254964 Gene

ENSEMBL:
Gene Tree for ENSG00000254964 (if available)
TreeFam:
Gene Tree for ENSG00000254964 (if available)

No data available for Orthologs for ENSG00000254964 Gene

Paralogs for ENSG00000254964 Gene

No data available for Paralogs for ENSG00000254964 Gene

Variants for ENSG00000254964 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254964 Gene

Disorders for ENSG00000254964 Gene

Additional Disease Information for ENSG00000254964

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000254964 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000254964 Gene

Publications for ENSG00000254964 Gene

No publications were found for ENSG00000254964 Gene.

No data available for Mastermind for ENSG00000254964 Gene

Products for ENSG00000254964 Gene

Sources for ENSG00000254964 Gene