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ENSG00000254927 Gene(RNA Gene)

 

GCID:
GC11M013826
GIFtS:
6
Genes Participants
UDN Logo

Aliases for ENSG00000254927 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000254927 Gene

  • Novel Transcript 5
  • AC027779.1 5

External Ids for ENSG00000254927 Gene

Previous GeneCards Identifiers for ENSG00000254927 Gene

  • GC11M013848

Summaries for ENSG00000254927 Gene

GeneCards Summary for ENSG00000254927 Gene

ENSG00000254927 is an RNA Gene.

Additional gene information for ENSG00000254927 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000254927 Gene

Genomics for ENSG00000254927 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000254927 Gene

Promoters and enhancers for ENSG00000254927 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J013872 Enhancer 0.9 ENCODE 0.4 +5.9 5853 1.6 CBFA2T2 GTF2F1 ZSCAN21 CTCF TRIM24 SP7 SMARCA4 MTA1 GMEB1 PKNOX1 LINC02545 ENSG00000254927
GH11J013875 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 +3.5 3498 0.8 ENSG00000254927 LINC02545
GH11J013874 Enhancer 0.6 Ensembl dbSUPER 0.7 +4.7 4698 0.4 IKZF1 KLF1 ENSG00000254927 LINC02545
GH11J013891 Enhancer 0.8 Ensembl dbSUPER 0.4 -12.0 -12002 1.4 TRIM24 EP300 NFE2 GATA3 JUND ATF7 EMSY CBFA2T3 ENSG00000254927 GC11P013907
GH11J013876 Enhancer 0.4 Ensembl dbSUPER 0.7 +2.6 2598 0.2 ENSG00000254927 LINC02545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000254927 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000254927 Gene

Genomic Locations for ENSG00000254927 Gene
chr11:13,826,843-13,879,499
(GRCh38/hg38)
Size:
52,657 bases
Orientation:
Minus strand
chr11:13,848,390-13,901,046
(GRCh37/hg19)
Size:
52,657 bases
Orientation:
Minus strand

Genomic View for ENSG00000254927 Gene

Genes around ENSG00000254927 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000254927 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254927 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

No data available for RefSeq DNA sequence for ENSG00000254927 Gene

Proteins for ENSG00000254927 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for ENSG00000254927 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254927 Gene

Domains & Families for ENSG00000254927 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000254927 Gene

Function for ENSG00000254927 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for ENSG00000254927 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254927 Gene

Localization for ENSG00000254927 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254927 Gene

Pathways & Interactions for ENSG00000254927 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
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SuperPathways for ENSG00000254927 Gene

No Data Available

Interacting Proteins for ENSG00000254927 Gene

Gene Ontology (GO) - Biological Process for ENSG00000254927 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000254927 Gene

Drugs & Compounds for ENSG00000254927 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for ENSG00000254927 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for ENSG00000254927 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254927 Gene

No ASD Table

Relevant External Links for ENSG00000254927 Gene

GeneLoc Exon Structure for
ENSG00000254927

Expression for ENSG00000254927 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000254927 Gene

mRNA expression in normal human tissues for ENSG00000254927 Gene
mRNA expression by GTEx for ENSG00000254927 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000254927 Gene

This gene is overexpressed in Testis (x36.0) and Kidney - Cortex (x16.9).
genes like me logo Genes that share expression patterns with ENSG00000254927: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254927 Gene

Orthologs for ENSG00000254927 Gene

Evolution for ENSG00000254927 Gene

ENSEMBL:
Gene Tree for ENSG00000254927 (if available)
TreeFam:
Gene Tree for ENSG00000254927 (if available)

No data available for Orthologs for ENSG00000254927 Gene

Paralogs for ENSG00000254927 Gene

No data available for Paralogs for ENSG00000254927 Gene

Variants for ENSG00000254927 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254927 Gene

Disorders for ENSG00000254927 Gene

No disorders were found for ENSG00000254927 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000254927 Gene

Publications for ENSG00000254927 Gene

No publications were found for ENSG00000254927 Gene.

No data available for External Links for ENSG00000254927 Gene

Products for ENSG00000254927 Gene

Sources for ENSG00000254927 Gene

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