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Aliases for ENSG00000254641 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000254641 Gene

  • Novel Transcript, Sense Overlapping TAF10 5
  • AC091564.3 5

External Ids for ENSG00000254641 Gene

Previous GeneCards Identifiers for ENSG00000254641 Gene

  • GC11M006629

Summaries for ENSG00000254641 Gene

GeneCards Summary for ENSG00000254641 Gene

ENSG00000254641 is an RNA Gene.

Additional gene information for ENSG00000254641 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000254641 Gene

Genomics for ENSG00000254641 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000254641 Gene

Promoters and enhancers for ENSG00000254641 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J006601 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 12.7 +2.6 2639 12.4 SP1 CC2D1A CTCF ZFX ELF3 MNT ZNF148 NKRF POLR2A MLLT1 RRP8 ILK TAF10 FAM160A2 CAVIN3 DNHD1 ENSG00000254641 DCHS1 ENSG00000254400 ENSG00000285338
GH11J006479 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 13.8 +128.7 128703 3.6 SP1 ZFX ELF3 SIX5 ZNF148 NKRF POLR2A ZNF687 MAFK TFE3 TIMM10B ARFIP2 ENSG00000283977 ENSG00000254641 RRP8 APBB1 SMPD1 GC11P006473 TRIM3
GH11J006742 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.1 -135.0 -134997 6.7 CC2D1A CBFA2T2 ZNF148 MLLT1 ZNF687 SMARCA4 RELA IKZF1 POLR2A DPF2 GVINP1 MRPL17 ILK OR2AG2 CAVIN3 RRP8 ENSG00000254641 TAF10 OR10A4 APBB1
GH11J006654 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE 10.7 -45.6 -45624 3 RERE SP5 PRDM1 HMG20B IKZF1 ZNF600 SOX13 ZNF512 RXRB POLR2A DCHS1 RRP8 FAM160A2 ENSG00000254641 ENSG00000251364 ENSG00000254595 ILK APBB1 OR2D2 TRIM3
GH11J006233 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.5 +375.3 375334 2.8 HDGF SP1 CC2D1A ZFX MNT NKRF POLR2A MLLT1 CEBPG GTF2F1 FAM160A2 CNGA4 RRP8 APBB1 ENSG00000254641 CCKBR GC11M006236
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000254641 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000254641 Gene

Genomic Locations for ENSG00000254641 Gene
chr11:6,608,667-6,610,135
(GRCh38/hg38)
Size:
1,469 bases
Orientation:
Minus strand
chr11:6,629,897-6,631,366
(GRCh37/hg19)
Size:
1,470 bases
Orientation:
Minus strand

Genomic View for ENSG00000254641 Gene

Genes around ENSG00000254641 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000254641 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254641 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254641 Gene

Proteins for ENSG00000254641 Gene

Post-translational modifications for ENSG00000254641 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254641 Gene

Domains & Families for ENSG00000254641 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000254641 Gene

Function for ENSG00000254641 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254641 Gene

Localization for ENSG00000254641 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254641 Gene

Pathways & Interactions for ENSG00000254641 Gene

PathCards logo

SuperPathways for ENSG00000254641 Gene

No Data Available

Interacting Proteins for ENSG00000254641 Gene

Gene Ontology (GO) - Biological Process for ENSG00000254641 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000254641 Gene

Drugs & Compounds for ENSG00000254641 Gene

No Compound Related Data Available

Transcripts for ENSG00000254641 Gene

mRNA/cDNA for ENSG00000254641 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254641 Gene

No ASD Table

Relevant External Links for ENSG00000254641 Gene

GeneLoc Exon Structure for
ENSG00000254641

Expression for ENSG00000254641 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000254641 Gene

genes like me logo Genes that share expression patterns with ENSG00000254641: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254641 Gene

Orthologs for ENSG00000254641 Gene

Evolution for ENSG00000254641 Gene

ENSEMBL:
Gene Tree for ENSG00000254641 (if available)
TreeFam:
Gene Tree for ENSG00000254641 (if available)

No data available for Orthologs for ENSG00000254641 Gene

Paralogs for ENSG00000254641 Gene

No data available for Paralogs for ENSG00000254641 Gene

Variants for ENSG00000254641 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254641 Gene

Disorders for ENSG00000254641 Gene

No disorders were found for ENSG00000254641 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000254641 Gene

Publications for ENSG00000254641 Gene

No publications were found for ENSG00000254641 Gene.

No data available for External Links for ENSG00000254641 Gene

Products for ENSG00000254641 Gene

Sources for ENSG00000254641 Gene

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