Aliases for ENSG00000254605 Gene

Data sources for ENSG00000254605 Gene:

RNA type for ENSG00000254605 Gene

lncRNA

Aliases for ENSG00000254605 Gene

External Ids for ENSG00000254605 Gene

Previous GeneCards Identifiers for ENSG00000254605 Gene

  • GC11M069860

Summaries for ENSG00000254605 Gene

GeneCards Summary for ENSG00000254605 Gene

ENSG00000254605 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000254605 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000254605 Gene

Genomics for ENSG00000254605 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000254605 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J070019 Enhancer 0.8 Ensembl ENCODE dbSUPER 250.7 +1.6 1554 1.9 L3MBTL2 ATF3 RNF2 MGA ENSG00000254605 HSALNG0085402 ANO1-AS1 ANO1 FADD
GH11J070016 Enhancer 0.6 Ensembl ENCODE dbSUPER 0.7 +4.4 4357 1.8 JUND ANO1-AS1 ENSG00000254605 HSALNG0085402 ANO1 FADD
GH11J069999 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.4 +21.5 21519 1.6 HDAC2 MAFG EGR1 TCF12 DPF2 ARID1B KDM1A CBFA2T2 NCOR1 EP300 ENSG00000255191 ANO1 ENSG00000254605 FADD
GH11J070005 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 +15.6 15576 1.3 BHLHE40 EGR2 ZNF512 FOS ZFHX2 CEBPB PRDM1 ENSG00000254605 ANO1 ENSG00000255191 FADD
GH11J069995 Enhancer 0.5 Ensembl 0.3 +25.1 25129 0.8 CEBPB ATF4 ZMYM3 KDM1A ATF3 BCOR ENSG00000255191 ANO1 ENSG00000254605 FADD
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000254605 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000254605 Gene

Latest Assembly
chr11:70,010,347-70,021,520
(GRCh38/hg38)
Size:
11,174 bases
Orientation:
Minus strand

Previous Assembly
chr11:69,860,964-69,867,165
(GRCh37/hg19 by Ensembl)
Size:
6,202 bases
Orientation:
Minus strand

Genomic View for ENSG00000254605 Gene

Genes around ENSG00000254605 on UCSC Golden Path with GeneCards custom track
ENSG00000254605 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000254605 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254605 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254605 Gene

Proteins for ENSG00000254605 Gene

Post-translational modifications for ENSG00000254605 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254605 Gene

Domains & Families for ENSG00000254605 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000254605 Gene

Function for ENSG00000254605 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254605 Gene

Localization for ENSG00000254605 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254605 Gene

Pathways & Interactions for ENSG00000254605 Gene

PathCards logo

SuperPathways for ENSG00000254605 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000254605 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000254605 Gene

Drugs & Compounds for ENSG00000254605 Gene

No Compound Related Data Available

Transcripts for ENSG00000254605 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000254605 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00002F4920_9606 lncRNA 658 4

Ensembl: ENST00000528507 (view in UCSC) ,

LncBook: HSALNT0177695,

LNCipedia: lnc-FGF3-1:1,

NONCODE: NONHSAT022622.2,

URS00003E5B42_9606 lncRNA 371 4

Ensembl: ENST00000533170 (view in UCSC) ,

LncBook: HSALNT0177696,

LNCipedia: lnc-FGF3-1:2,

NONCODE: NONHSAT022623.2,

URS0001BEEE53_9606 lncRNA 7432 1

LncBook: HSALNT0177693,

URS0001BD282C_9606 lncRNA 655 1

LncBook: HSALNT0177695,

URS0001BF18C1_9606 lncRNA 369 1

LncBook: HSALNT0177696,

ENSG00000254605 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254605 Gene

No ASD Table

Relevant External Links for ENSG00000254605 Gene

GeneLoc Exon Structure for
ENSG00000254605

No data available for mRNA/cDNA for ENSG00000254605 Gene

Expression for ENSG00000254605 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000254605 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000254605 Gene

This gene is overexpressed in Liver (x5.9), Artery - Aorta (x5.0), and Heart - Atrial Appendage (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000254605: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254605 Gene

Orthologs for ENSG00000254605 Gene

Evolution for ENSG00000254605 Gene

ENSEMBL:
Gene Tree for ENSG00000254605 (if available)
TreeFam:
Gene Tree for ENSG00000254605 (if available)

No data available for Orthologs for ENSG00000254605 Gene

Paralogs for ENSG00000254605 Gene

No data available for Paralogs for ENSG00000254605 Gene

Variants for ENSG00000254605 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254605 Gene

Disorders for ENSG00000254605 Gene

Additional Disease Information for ENSG00000254605

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000254605 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000254605 Gene

Publications for ENSG00000254605 Gene

No publications were found for ENSG00000254605 Gene.

No data available for Mastermind for ENSG00000254605 Gene

Products for ENSG00000254605 Gene

Sources for ENSG00000254605 Gene