Aliases for ENSG00000254573 Gene

Data sources for ENSG00000254573 Gene:

Subcategory (RNA class) for ENSG00000254573 Gene

lncRNA

Aliases for ENSG00000254573 Gene

External Ids for ENSG00000254573 Gene

Previous GeneCards Identifiers for ENSG00000254573 Gene

  • GC11P134433

Summaries for ENSG00000254573 Gene

GeneCards Summary for ENSG00000254573 Gene

ENSG00000254573 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000254573 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000254573 Gene

Genomics for ENSG00000254573 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000254573 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J134541 Enhancer 0.7 Ensembl ENCODE 0.4 -11.0 -10960 3.5 ELF1 ZNF623 CTBP1 SMARCE1 PKNOX1 FOS KLF4 KDM1A HSALNG0088395 ENSG00000254573 HSALNG0088396 B3GAT1
GH11J134559 Enhancer 0.4 Ensembl 0.4 +6.5 6496 2 ZIC2 GLIS1 GATA2 PTP4A2P2 NCAPD3 GLB1L2 HSALNG0088397 ENSG00000254573 HSALNG0088398 B3GAT1
GH11J134562 Enhancer 0.3 Ensembl 0.4 +8.8 8796 1 GLIS1 ENSG00000254573 HSALNG0088397 HSALNG0088398 B3GAT1
GH11J134574 Enhancer 0.2 Ensembl 0.4 +20.0 19997 0.2 HSALNG0088398 ENSG00000254573 HSALNG0088397 B3GAT1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000254573 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000254573 Gene

Latest Assembly
chr11:134,554,104-134,575,239
(GRCh38/hg38)
Size:
21,136 bases
Orientation:
Plus strand

Previous Assembly
chr11:134,433,290-134,442,950
(GRCh37/hg19 by Ensembl)
Size:
9,661 bases
Orientation:
Plus strand

Genomic View for ENSG00000254573 Gene

Genes around ENSG00000254573 on UCSC Golden Path with GeneCards custom track
ENSG00000254573 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000254573 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254573 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254573 Gene

Proteins for ENSG00000254573 Gene

Post-translational modifications for ENSG00000254573 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254573 Gene

Domains & Families for ENSG00000254573 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000254573 Gene

Function for ENSG00000254573 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254573 Gene

Localization for ENSG00000254573 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254573 Gene

Pathways & Interactions for ENSG00000254573 Gene

PathCards logo

SuperPathways for ENSG00000254573 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000254573 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000254573 Gene

Drugs & Compounds for ENSG00000254573 Gene

No Compound Related Data Available

Transcripts for ENSG00000254573 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000254573 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS000035E072_9606 lncRNA 517 4

Ensembl: ENST00000532652 (view in UCSC) ,

LncBook: HSALNT0183854,

LNCipedia: lnc-GLB1L2-2:1,

NONCODE: NONHSAT025278.2,

URS00009BDF7C_9606 lncRNA 514 2

LncBook: HSALNT0183855,

NONCODE: NONHSAT159944.1,

URS0000EC0849_9606 lncRNA 16973 1

LncBook: HSALNT0183847,

URS0001BE8E52_9606 lncRNA 16973 1

LncBook: HSALNT0183847,

URS0001BEE274_9606 lncRNA 3655 1

LncBook: HSALNT0183856,

ENSG00000254573 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254573 Gene

No ASD Table

Relevant External Links for ENSG00000254573 Gene

GeneLoc Exon Structure for
ENSG00000254573

No data available for mRNA/cDNA for ENSG00000254573 Gene

Expression for ENSG00000254573 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000254573 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000254573 Gene

This gene is overexpressed in Kidney - Cortex (x19.0), Colon - Transverse (x6.2), Small Intestine - Terminal Ileum (x5.8), Stomach (x5.3), and Cervix - Endocervix (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000254573: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254573 Gene

Orthologs for ENSG00000254573 Gene

Evolution for ENSG00000254573 Gene

ENSEMBL:
Gene Tree for ENSG00000254573 (if available)
TreeFam:
Gene Tree for ENSG00000254573 (if available)

No data available for Orthologs for ENSG00000254573 Gene

Paralogs for ENSG00000254573 Gene

No data available for Paralogs for ENSG00000254573 Gene

Variants for ENSG00000254573 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254573 Gene

Disorders for ENSG00000254573 Gene

Additional Disease Information for ENSG00000254573

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000254573 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000254573 Gene

Publications for ENSG00000254573 Gene

No publications were found for ENSG00000254573 Gene.

No data available for Mastermind for ENSG00000254573 Gene

Products for ENSG00000254573 Gene

Sources for ENSG00000254573 Gene