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Aliases for ENSG00000254545 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000254545 Gene

  • AL354919.2 5

External Ids for ENSG00000254545 Gene

Previous GeneCards Identifiers for ENSG00000254545 Gene

  • GC01P032255

Summaries for ENSG00000254545 Gene

GeneCards Summary for ENSG00000254545 Gene

ENSG00000254545 is an RNA Gene.

Additional gene information for ENSG00000254545 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000254545 Gene

Genomics for ENSG00000254545 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000254545 Gene

Promoters and enhancers for ENSG00000254545 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J031787 Promoter/Enhancer 2 FANTOM5 Ensembl ENCODE dbSUPER 650.7 -0.2 -184 2.9 HDGF PKNOX1 CLOCK SMAD1 ARID4B SIN3A FEZF1 ZNF2 YY1 POLR2B ENSG00000254545 SNRNP40 TSSK3 TMEM39B RBBP4 COL16A1 TXLNA ENSG00000229447 KHDRBS1 FAM229A
GH01J031795 Promoter/Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +8.8 8793 4.5 PTBP1 ATF1 KLF17 GTF3C2 ZNF335 GLIS2 ZNF366 EGR1 FOS EGR2 RBBP4 KHDRBS1 COL16A1 TXLNA SNRNP40 TSSK3 ENSG00000224066 ZBTB8OS EIF3I PEF1
GH01J031780 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 -6.9 -6858 2.9 HDGF PKNOX1 ATF1 ARNT TCF12 GATA2 ATF7 ZNF263 NCOA1 REST ADGRB2 SNRNP40 TMEM39B KHDRBS1 RBBP4 TXLNA TSSK3 ENSG00000229447 DCDC2B COL16A1
GH01J031785 Enhancer 0.7 FANTOM5 dbSUPER 0.7 -3.8 -3835 0.1 SCRT1 SCRT2 ZBTB33 EBF1 IQCC ENSG00000254545 GC01M031767
GH01J031802 Enhancer 0.7 Ensembl dbSUPER 0.4 +13.7 13671 0.8 SMARCA5 BCOR ADNP SCRT2 ZMYM3 KDM1A PTP4A2 COL16A1 TINAGL1 LOC105378626 PEF1 KHDRBS1 SPOCD1 MTMR9LP ENSG00000254545
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000254545 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000254545 Gene

Genomic Locations for ENSG00000254545 Gene
chr1:31,789,130-31,791,322
(GRCh38/hg38)
Size:
2,193 bases
Orientation:
Plus strand
chr1:32,254,731-32,256,923
(GRCh37/hg19)
Size:
2,193 bases
Orientation:
Plus strand

Genomic View for ENSG00000254545 Gene

Genes around ENSG00000254545 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000254545 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254545 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254545 Gene

Proteins for ENSG00000254545 Gene

Post-translational modifications for ENSG00000254545 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254545 Gene

Domains & Families for ENSG00000254545 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000254545 Gene

Function for ENSG00000254545 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254545 Gene

Localization for ENSG00000254545 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254545 Gene

Pathways & Interactions for ENSG00000254545 Gene

SuperPathways for ENSG00000254545 Gene

No Data Available

Interacting Proteins for ENSG00000254545 Gene

Gene Ontology (GO) - Biological Process for ENSG00000254545 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000254545 Gene

Drugs & Compounds for ENSG00000254545 Gene

No Compound Related Data Available

Transcripts for ENSG00000254545 Gene

mRNA/cDNA for ENSG00000254545 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
(1) RNA Central transcripts :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254545 Gene

No ASD Table

Relevant External Links for ENSG00000254545 Gene

GeneLoc Exon Structure for
ENSG00000254545

Expression for ENSG00000254545 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000254545 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000254545 Gene

This gene is overexpressed in Bladder (x5.3) and Lung (x4.6).
genes like me logo Genes that share expression patterns with ENSG00000254545: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254545 Gene

Orthologs for ENSG00000254545 Gene

Evolution for ENSG00000254545 Gene

ENSEMBL:
Gene Tree for ENSG00000254545 (if available)
TreeFam:
Gene Tree for ENSG00000254545 (if available)

No data available for Orthologs for ENSG00000254545 Gene

Paralogs for ENSG00000254545 Gene

No data available for Paralogs for ENSG00000254545 Gene

Variants for ENSG00000254545 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254545 Gene

Disorders for ENSG00000254545 Gene

No disorders were found for ENSG00000254545 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000254545 Gene

Publications for ENSG00000254545 Gene

No publications were found for ENSG00000254545 Gene.

Products for ENSG00000254545 Gene

Sources for ENSG00000254545 Gene

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