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Aliases for ENSG00000254533 Gene

Subcategory (RNA class) for ENSG00000254533 Gene

lncRNA

Quality Score for this RNA gene is

1

Aliases for ENSG00000254533 Gene

  • AF186192.1 5

External Ids for ENSG00000254533 Gene

ORGUL Members for ENSG00000254533 Gene

Previous GeneCards Identifiers for ENSG00000254533 Gene

  • GC08M145923

Summaries for ENSG00000254533 Gene

GeneCards Summary for ENSG00000254533 Gene

ENSG00000254533 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000254533 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000254533 Gene

Genomics for ENSG00000254533 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000254533 Gene

Promoters and enhancers for ENSG00000254533 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08I144699 Promoter/Enhancer 1.1 Ensembl ENCODE 550.8 -1.3 -1266 1.4 KLF1 RXRA SIN3A NR2F2 YY1 GABPA KLF9 ZNF143 ZNF24 KLF8 ARHGAP39 ENSG00000254533 LOC100996662 ENSG00000255085 CPSF1
GH08I144455 Enhancer 1.3 Ensembl ENCODE 50.4 +242.7 242739 1.6 HDGF HNRNPUL1 PKNOX1 FOXA2 ARNT ZFP64 SIN3A ZNF2 POLR2B ZNF766 ZNF251 ZNF623 ZNF7 LRRC14 ZNF250 ZNF16 CPSF1 VPS28 ZNF517 ZNF34
GH08I144506 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 24.7 +190.2 190216 4 HDGF PKNOX1 CLOCK ARNT ARID4B SIN3A DMAP1 ZNF2 ZBTB7B IRF4 MFSD3 ZNF7 CPSF1 VPS28 ZNF250 ZNF623 ZNF251 ENSG00000254533 LRRC14 ZNF707
GH08I144073 Enhancer 1.5 FANTOM5 Ensembl ENCODE 20.2 +624.8 624788 1.2 HDGF PKNOX1 ATF1 SMAD1 ARNT TCF12 POLR2B ZNF766 ATF7 ZNF491 WDR97 ZNF251 ENSG00000254533 TSSK5P SPATC1 ENSG00000255085 CYC1 SHARPIN MAF1 ZNF252P
GH08I143914 Promoter/Enhancer 2.9 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.2 +762.1 762055 45.2 CLOCK MLX FEZF1 DMAP1 IRF4 YY1 E2F8 ZNF143 SP3 MEF2D PLEC ZNF251 ZNF517 ZNF250 ZNF7 LOC105375803 ZNF623 CPSF1 VPS28 LRRC14
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000254533 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000254533 Gene

Genomic Locations for ENSG00000254533 Gene
chr8:144,698,614-144,699,185
(GRCh38/hg38)
Size:
572 bases
Orientation:
Minus strand
chr8:145,923,999-145,924,570
(GRCh37/hg19)

Genomic View for ENSG00000254533 Gene

Genes around ENSG00000254533 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000254533 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000254533 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000254533 Gene

Proteins for ENSG00000254533 Gene

Post-translational modifications for ENSG00000254533 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000254533 Gene

Domains & Families for ENSG00000254533 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000254533 Gene

Function for ENSG00000254533 Gene

Phenotypes From GWAS Catalog for ENSG00000254533 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000254533 Gene

Localization for ENSG00000254533 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000254533 Gene

Pathways & Interactions for ENSG00000254533 Gene

SuperPathways for ENSG00000254533 Gene

No Data Available

Interacting Proteins for ENSG00000254533 Gene

Gene Ontology (GO) - Biological Process for ENSG00000254533 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000254533 Gene

Drugs & Compounds for ENSG00000254533 Gene

No Compound Related Data Available

Transcripts for ENSG00000254533 Gene

mRNA/cDNA for ENSG00000254533 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000254533 Gene

No ASD Table

Relevant External Links for ENSG00000254533 Gene

GeneLoc Exon Structure for
ENSG00000254533

Expression for ENSG00000254533 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000254533 Gene

genes like me logo Genes that share expression patterns with ENSG00000254533: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000254533 Gene

Orthologs for ENSG00000254533 Gene

Evolution for ENSG00000254533 Gene

ENSEMBL:
Gene Tree for ENSG00000254533 (if available)
TreeFam:
Gene Tree for ENSG00000254533 (if available)

No data available for Orthologs for ENSG00000254533 Gene

Paralogs for ENSG00000254533 Gene

No data available for Paralogs for ENSG00000254533 Gene

Variants for ENSG00000254533 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000254533 Gene

Disorders for ENSG00000254533 Gene

No disorders were found for ENSG00000254533 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000254533 Gene

Publications for ENSG00000254533 Gene

No publications were found for ENSG00000254533 Gene.

Products for ENSG00000254533 Gene

Sources for ENSG00000254533 Gene

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