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Aliases for ENSG00000253535 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000253535 Gene

  • Novel Transcript 5
  • AC120193.1 5

External Ids for ENSG00000253535 Gene

Previous GeneCards Identifiers for ENSG00000253535 Gene

  • GC08M024153

Summaries for ENSG00000253535 Gene

GeneCards Summary for ENSG00000253535 Gene

ENSG00000253535 is an RNA Gene.

Additional gene information for ENSG00000253535 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000253535 Gene

Genomics for ENSG00000253535 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000253535 Gene

Promoters and enhancers for ENSG00000253535 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J024912 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 600.7 -1.1 -1128 2 POLR2A REST EHMT2 USF1 ZNF366 ZNF143 SIN3A L3MBTL2 USF2 MIER2 ENSG00000253535 ENSG00000272163 NEFM LOC105379329
GH08J024955 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 11.7 -43.4 -43428 2.6 ZNF121 ZSCAN21 YY1 SP7 KLF14 PRDM1 MZF1 ZNF547 GLIS2 ZBTB8A NEFL ENSG00000272157 MIR6841 PIR48208 PIR37905 ENSG00000253535 NEFM GC08M024931
GH08J024366 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 12.6 +544.8 544838 1.7 CREM MLLT1 ZBED1 IKZF2 CBFB DPF2 EED RUNX3 BCLAF1 FOXA2 ADAM28 ENSG00000253535 ADAMDEC1 GC08P024271 LOC101929294 GC08P024089
GH08J024348 Enhancer 1.1 FANTOM5 ENCODE dbSUPER 12.3 +562.2 562183 2.3 ELF3 ZNF24 ZNF644 CEBPA GATAD2A GABPA SOX13 FOXA2 SAP130 TEAD1 ENSG00000253535 ADAM28 ADAMDEC1 GC08P024271 LOC101929294 GC08P024089
GH08J024998 Enhancer 1.3 FANTOM5 ENCODE 11 -88.0 -88027 3.7 SP1 CC2D1A CTCF ZNF384 MAFK ZBTB7A SP7 PRDM1 EGR1 GLIS2 NEFM ENSG00000253535 ENSG00000253832 LOC105379330 GC08M024931
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000253535 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000253535 Gene

Genomic Locations for ENSG00000253535 Gene
chr8:24,295,814-24,912,073
(GRCh38/hg38)
Size:
616,260 bases
Orientation:
Minus strand
chr8:24,153,327-24,769,586
(GRCh37/hg19)
Size:
616,260 bases
Orientation:
Minus strand

Genomic View for ENSG00000253535 Gene

Genes around ENSG00000253535 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000253535 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253535 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253535 Gene

Proteins for ENSG00000253535 Gene

Post-translational modifications for ENSG00000253535 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253535 Gene

Domains & Families for ENSG00000253535 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000253535 Gene

Function for ENSG00000253535 Gene

Phenotypes From GWAS Catalog for ENSG00000253535 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253535 Gene

Localization for ENSG00000253535 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253535 Gene

Pathways & Interactions for ENSG00000253535 Gene

PathCards logo

SuperPathways for ENSG00000253535 Gene

No Data Available

Interacting Proteins for ENSG00000253535 Gene

Gene Ontology (GO) - Biological Process for ENSG00000253535 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000253535 Gene

Drugs & Compounds for ENSG00000253535 Gene

No Compound Related Data Available

Transcripts for ENSG00000253535 Gene

mRNA/cDNA for ENSG00000253535 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(4) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253535 Gene

No ASD Table

Relevant External Links for ENSG00000253535 Gene

GeneLoc Exon Structure for
ENSG00000253535

Expression for ENSG00000253535 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000253535 Gene

mRNA expression in normal human tissues for ENSG00000253535 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000253535 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x13.2), Spleen (x6.6), and Colon - Transverse (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000253535: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253535 Gene

Orthologs for ENSG00000253535 Gene

Evolution for ENSG00000253535 Gene

ENSEMBL:
Gene Tree for ENSG00000253535 (if available)
TreeFam:
Gene Tree for ENSG00000253535 (if available)

No data available for Orthologs for ENSG00000253535 Gene

Paralogs for ENSG00000253535 Gene

No data available for Paralogs for ENSG00000253535 Gene

Variants for ENSG00000253535 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253535 Gene

Disorders for ENSG00000253535 Gene

No disorders were found for ENSG00000253535 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253535 Gene

Publications for ENSG00000253535 Gene

No publications were found for ENSG00000253535 Gene.

No data available for External Links for ENSG00000253535 Gene

Products for ENSG00000253535 Gene

Sources for ENSG00000253535 Gene

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