Aliases for ENSG00000253535 Gene

Aliases for ENSG00000253535 Gene

  • Novel Transcript 5
  • NONHSAG049777 94
  • HSALNG0064035 169
  • AC120193.1 5
  • Lnc-NEFL-6 170

External Ids for ENSG00000253535 Gene

Previous GeneCards Identifiers for ENSG00000253535 Gene

  • GC08M024153

Summaries for ENSG00000253535 Gene

GeneCards Summary for ENSG00000253535 Gene

ENSG00000253535 is an Uncategorized gene.

Additional gene information for ENSG00000253535 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000253535 Gene

Genomics for ENSG00000253535 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000253535 Gene

Promoters and enhancers for ENSG00000253535 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J024911 Promoter 0.3 Ensembl 750.6 +0.2 172 0.2 ENSG00000253535 NEFM LOC105379329 piR-50852-164
GH08J024913 Promoter 0.3 Ensembl 750.6 -0.2 -228 0.2 ENSG00000253535 NEFM ENSG00000272163 LOC105379329
GH08J024955 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 11.7 -44.0 -44028 3.4 ZNF785 CTCF ZBTB6 ZNF362 ZNF121 SP7 ZSCAN21 PRDM1 KLF14 ZNF547 NEFL ENSG00000272157 lnc-NEFL-2 piR-44906 NEFM ENSG00000253535
GH08J024366 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 12.6 +542.8 542787 5.8 FOXA1 LCORL ETV6 NFIB SP1 CEBPG MLLT1 CREM ZBED1 ZNF644 ADAM28 ENSG00000253535 ADAMDEC1 piR-38351-449 LOC101929294
GH08J024998 Promoter/Enhancer 1.5 FANTOM5 ENCODE CraniofacialAtlas 11 -88.0 -88027 3.7 CTCF ZNF362 CC2D1A RAD21 POLR2A SP1 ZNF384 MAFK SP7 PRDM1 ENSG00000288055 NEFM ENSG00000253535 ENSG00000253832 LOC105379330
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000253535 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000253535 Gene

Genomic Locations for ENSG00000253535 Gene
chr8:24,295,814-24,912,073
(GRCh38/hg38)
Size:
616,260 bases
Orientation:
Minus strand
chr8:24,153,327-24,769,586
(GRCh37/hg19)
Size:
616,260 bases
Orientation:
Minus strand

Genomic View for ENSG00000253535 Gene

Genes around ENSG00000253535 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000253535 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253535 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253535 Gene

Proteins for ENSG00000253535 Gene

Post-translational modifications for ENSG00000253535 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253535 Gene

Domains & Families for ENSG00000253535 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000253535 Gene

Function for ENSG00000253535 Gene

Phenotypes From GWAS Catalog for ENSG00000253535 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253535 Gene

Localization for ENSG00000253535 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253535 Gene

Pathways & Interactions for ENSG00000253535 Gene

PathCards logo

SuperPathways for ENSG00000253535 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000253535 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000253535 Gene

Drugs & Compounds for ENSG00000253535 Gene

No Compound Related Data Available

Transcripts for ENSG00000253535 Gene

mRNA/cDNA for ENSG00000253535 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(16) RNACentral transcripts :
(16) LNCipedia transcripts :
(3) NONCODE transcripts :
(3) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253535 Gene

No ASD Table

Relevant External Links for ENSG00000253535 Gene

GeneLoc Exon Structure for
ENSG00000253535

Expression for ENSG00000253535 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000253535 Gene

mRNA expression in normal human tissues for ENSG00000253535 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000253535 Gene

This gene is overexpressed in Small Intestine - Terminal Ileum (x13.2), Spleen (x6.6), and Colon - Transverse (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000253535: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253535 Gene

Orthologs for ENSG00000253535 Gene

Evolution for ENSG00000253535 Gene

ENSEMBL:
Gene Tree for ENSG00000253535 (if available)
TreeFam:
Gene Tree for ENSG00000253535 (if available)

No data available for Orthologs for ENSG00000253535 Gene

Paralogs for ENSG00000253535 Gene

No data available for Paralogs for ENSG00000253535 Gene

Variants for ENSG00000253535 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253535 Gene

Disorders for ENSG00000253535 Gene

No disorders were found for ENSG00000253535 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253535 Gene

Publications for ENSG00000253535 Gene

No publications were found for ENSG00000253535 Gene.

No data available for External Links for ENSG00000253535 Gene

Products for ENSG00000253535 Gene

Sources for ENSG00000253535 Gene