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Aliases for ENSG00000253508 Gene

Quality Score for this RNA gene is

1

Aliases for ENSG00000253508 Gene

  • AC004080.2 5

External Ids for ENSG00000253508 Gene

Previous GeneCards Identifiers for ENSG00000253508 Gene

  • GC07M027227
  • GC07M027250
  • GC07M027257
  • GC07M027188
  • GC07M027191

Summaries for ENSG00000253508 Gene

GeneCards Summary for ENSG00000253508 Gene

ENSG00000253508 is an RNA Gene.

Additional gene information for ENSG00000253508 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000253508 Gene

Genomics for ENSG00000253508 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000253508 Gene

Promoters and enhancers for ENSG00000253508 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I027193 Enhancer 0.9 FANTOM5 dbSUPER 550.8 +1.2 1160 0.2 ZBTB10 SUZ12 ZNF398 SMARCB1 ZNF335 POLR2A PRDM10 ZBTB26 EZH2 ENSG00000253508 HOXA11 HOXA13 HOXA10 ENSG00000278020
GH07I027192 Enhancer 0.7 ENCODE dbSUPER 550.8 +0.6 591 0.2 POLR2A SUZ12 PATZ1 ZBTB26 EZH2 ENSG00000253508 HOTAIRM1 ENSG00000278020
GH07I027095 Promoter/Enhancer 3.4 VISTA UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.3 +55.3 55253 86.3 MLX FEZF1 DMAP1 YY1 ZNF213 ZNF143 SP3 NFYC SSRP1 ZNF610 HOXA2 HOXA9 HOXA10 HOXA1 HOXA3 HOXA6 HOXA4 HOXA5 HOXA7 HNRNPA2B1
GH07I027920 Enhancer 1 Ensembl ENCODE 11.6 -727.9 -727867 0.6 MZF1 ZNF76 SIN3A BMI1 FEZF1 ZNF2 RAD21 RFX5 ZNF335 ZNF213 ENSG00000253508 HOTTIP HOXA13 HOXA11 HOXA11-AS HOXA9 HOXA10 ENSG00000253308 EVX1 EVX1-AS
GH07I028018 Enhancer 1 Ensembl ENCODE 10.8 -826.3 -826305 2.2 RB1 ZNF2 RAD21 RFX5 ZNF143 RCOR1 RUNX3 CREM DEK SMARCA5 HOXA13 ENSG00000253508 HOTTIP HOXA11 HOXA10 HOXA11-AS HOXA9 PIR54187 PIR39851 JAZF1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around ENSG00000253508 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000253508 Gene

Genomic Locations for ENSG00000253508 Gene
chr7:27,186,573-27,193,448
(GRCh38/hg38)
Size:
6,876 bases
Orientation:
Minus strand
chr7:27,226,192-27,233,067
(GRCh37/hg19)

Genomic View for ENSG00000253508 Gene

Genes around ENSG00000253508 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000253508 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253508 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253508 Gene

Proteins for ENSG00000253508 Gene

Post-translational modifications for ENSG00000253508 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253508 Gene

Domains & Families for ENSG00000253508 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000253508 Gene

Function for ENSG00000253508 Gene

Phenotypes From GWAS Catalog for ENSG00000253508 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253508 Gene

Localization for ENSG00000253508 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253508 Gene

Pathways & Interactions for ENSG00000253508 Gene

SuperPathways for ENSG00000253508 Gene

No Data Available

Interacting Proteins for ENSG00000253508 Gene

Gene Ontology (GO) - Biological Process for ENSG00000253508 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000253508 Gene

Drugs & Compounds for ENSG00000253508 Gene

No Compound Related Data Available

Transcripts for ENSG00000253508 Gene

mRNA/cDNA for ENSG00000253508 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253508 Gene

No ASD Table

Relevant External Links for ENSG00000253508 Gene

GeneLoc Exon Structure for
ENSG00000253508

Expression for ENSG00000253508 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000253508 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000253508 Gene

This gene is overexpressed in Prostate (x9.5), Cervix - Endocervix (x8.7), Cervix - Ectocervix (x8.4), Colon - Transverse (x7.5), Vagina (x5.6), and Colon - Sigmoid (x4.2).
genes like me logo Genes that share expression patterns with ENSG00000253508: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253508 Gene

Orthologs for ENSG00000253508 Gene

Evolution for ENSG00000253508 Gene

ENSEMBL:
Gene Tree for ENSG00000253508 (if available)
TreeFam:
Gene Tree for ENSG00000253508 (if available)

No data available for Orthologs for ENSG00000253508 Gene

Paralogs for ENSG00000253508 Gene

No data available for Paralogs for ENSG00000253508 Gene

Variants for ENSG00000253508 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253508 Gene

Disorders for ENSG00000253508 Gene

No disorders were found for ENSG00000253508 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253508 Gene

Publications for ENSG00000253508 Gene

No publications were found for ENSG00000253508 Gene.

Products for ENSG00000253508 Gene

Sources for ENSG00000253508 Gene

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