Aliases for ENSG00000253280 Gene
Quality Score for this RNA gene is
13
Aliases for ENSG00000253280 Gene
- AC068880.2 5
External Ids for ENSG00000253280 Gene
- Ensembl: ENSG00000253280
Previous GeneCards Identifiers for ENSG00000253280 Gene
- GC08M019111
Summaries for ENSG00000253280 Gene
GeneCards Summary for ENSG00000253280 Gene
ENSG00000253280 is an RNA Gene.
Additional gene information for ENSG00000253280 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000253280 Gene
Genomics for ENSG00000253280 Gene
GeneHancer (GH) Regulatory Elements for ENSG00000253280 Gene
Promoters and enhancers for ENSG00000253280 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH08J019755 | Promoter/Enhancer | 1.9 | EPDnew Ensembl ENCODE | 14.6 | -499.9 | -499871 | 2.7 | PKNOX1 SIN3A FEZF1 ZNF2 GLIS2 ZNF143 REST NFIL3 SSRP1 GLIS1 | CSGALNACT1 ENSG00000253280 ENSG00000254201 LOC442382 LZTS1-AS1 LOC105379314 ENSG00000253335 SH2D4A ENSG00000253270 | |
| GH08J019254 | Enhancer | 0.2 | Ensembl | 0.7 | +2.4 | 2443 | 1 | SH2D4A ENSG00000253280 ENSG00000253557 ENSG00000254201 LOC105379300 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)
GeneHancers around ENSG00000253280 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for ENSG00000253280 Gene
Genomic Locations for ENSG00000253280 Gene
- chr8:19,254,241-19,257,334
- (GRCh38/hg38)
- Size:
- 3,094 bases
- Orientation:
- Minus strand
- chr8:19,111,751-19,114,844
- (GRCh37/hg19)
- Size:
- 3,094 bases
- Orientation:
- Minus strand
Genomic View for ENSG00000253280 Gene
Genes around ENSG00000253280 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 8p21.3 by Ensembl
ENSG00000253280 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
No data available for RefSeq DNA sequence for ENSG00000253280 Gene
Proteins for ENSG00000253280 Gene
Post-translational modifications for ENSG00000253280 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for ENSG00000253280
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000253280
- Origene Custom Protein Services for ENSG00000253280
- Search GeneTex for Proteins for ENSG00000253280
No data available for DME Specific Peptides for ENSG00000253280 Gene
Domains & Families for ENSG00000253280 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000253280 Gene
Function for ENSG00000253280 Gene
Phenotypes From GWAS Catalog for ENSG00000253280 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for ENSG00000253280
-
miRNA Products
Inhibitory RNA Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253280 Gene
Localization for ENSG00000253280 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253280 Gene
Transcripts for ENSG00000253280 Gene
mRNA/cDNA for ENSG00000253280 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
-
- ENST00000521016 362 bps (uc064ksa.1)
- (1) RNA Central transcripts :
CRISPR Products
- Browse CRISPR knockouts for ENSG00000253280
miRNA Products
Inhibitory RNA Products
Relevant External Links for ENSG00000253280 Gene
- GeneLoc Exon Structure for
- ENSG00000253280
Expression for ENSG00000253280 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253280 Gene
Orthologs for ENSG00000253280 Gene
No data available for Orthologs for ENSG00000253280 Gene
Paralogs for ENSG00000253280 Gene
No data available for Paralogs for ENSG00000253280 Gene
Variants for ENSG00000253280 Gene
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253280 Gene
Disorders for ENSG00000253280 Gene
No disorders were found for ENSG00000253280 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253280 Gene
Publications for ENSG00000253280 Gene
No publications were found for ENSG00000253280 Gene.
Products for ENSG00000253280 Gene
- Browse R&D Systems for Antibodies
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- Browse Human Proteins and Enzymes
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- Browse Proteins and Enzymes
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- Browse Immunoprecipitation Assays
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- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
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- Custom Antibody Services
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- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for ENSG00000253280
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- Browse CRISPR knockouts for ENSG00000253280
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- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- High-throughput Antibody Production Service
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- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Search GeneTex for Antibodies for ENSG00000253280
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- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for ENSG00000253280
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for ENSG00000253280
- Search GeneCopoeia for miRNA 3'UTR Target clone products for ENSG00000253280
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for ENSG00000253280
Sources for ENSG00000253280 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew
- (158) Applied Biosystems
- (159) GlyConnect
- (160) Aminode
- (161) GeneCopoeia
- (162) GPS-Prot
- (163) RNACentral
- (164) LncRNADisease
- (165) LOVD
- (166) miR2Disease
- (167) DiseaseEnhancer
- (168) Boster Bio
- (169) Biorbyt