Aliases for ENSG00000253168 Gene

Data sources for ENSG00000253168 Gene:

Subcategory (RNA class) for ENSG00000253168 Gene

lncRNA

Aliases for ENSG00000253168 Gene

External Ids for ENSG00000253168 Gene

Previous GeneCards Identifiers for ENSG00000253168 Gene

  • GC08P017561

Summaries for ENSG00000253168 Gene

GeneCards Summary for ENSG00000253168 Gene

ENSG00000253168 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000253168 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000253168 Gene

Genomics for ENSG00000253168 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000253168 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH08J017691 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE dbSUPER 250.7 -0.3 -325 1.6 GABPA RBM22 RAD51 ZNF189 USF2 BHLHE40 GABPB1 ZNF354B USF1 ZBTB20 ENSG00000253168 HSALNG0063679 PCM1 PDGFRL HSALNG0063678 lnc-FGL1-3 MTUS1 RF00017-6858
GH08J017658 Enhancer 1.2 ENCODE CraniofacialAtlas dbSUPER 11.8 -29.6 -29607 9 FEZF1 CEBPA ZIC2 FOXA2 SMAD4 SAP130 RXRA CTBP1 RARA ZBTB33 ENSG00000253168 MTUS1 MIR548V HSALNG0063676 lnc-FGL1-3 PDGFRL RF00017-6858
GH08J017596 Enhancer 0.8 Ensembl ENCODE dbSUPER 12.4 -95.5 -95542 1.6 CEBPB CTCF BHLHE40 NFE2L2 FOS ENSG00000277466 PDGFRL ENSG00000253168 ENSG00000287303 MTUS1
GH08J017725 Enhancer 0.6 ENCODE dbSUPER 12.1 +34.1 34116 2.2 JUND ZNF652 JUN FOS ZNF680 ENSG00000253168 FGL1 PCM1 lnc-FGL1-3 piR-46847-262 MTUS1 RF00017-6858 PDGFRL RF00017-6860
GH08J017667 Enhancer 0.4 ENCODE dbSUPER 11.8 -24.6 -24561 0.2 HLF ENSG00000253168 MTUS1 MIR548V HSALNG0063676 lnc-FGL1-3 PDGFRL RF00017-6858
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000253168 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000253168 Gene

Latest Assembly
chr8:17,692,348-17,707,324
(GRCh38/hg38)
Size:
14,977 bases
Orientation:
Plus strand

Previous Assembly
chr8:17,561,497-17,563,696
(GRCh37/hg19 by Ensembl)
Size:
2,200 bases
Orientation:
Plus strand

Genomic View for ENSG00000253168 Gene

Genes around ENSG00000253168 on UCSC Golden Path with GeneCards custom track
ENSG00000253168 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000253168 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253168 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253168 Gene

Proteins for ENSG00000253168 Gene

Post-translational modifications for ENSG00000253168 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253168 Gene

Domains & Families for ENSG00000253168 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000253168 Gene

Function for ENSG00000253168 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253168 Gene

Localization for ENSG00000253168 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253168 Gene

Pathways & Interactions for ENSG00000253168 Gene

PathCards logo

SuperPathways for ENSG00000253168 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000253168 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000253168 Gene

Drugs & Compounds for ENSG00000253168 Gene

No Compound Related Data Available

Transcripts for ENSG00000253168 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000253168 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00002FF7BE_9606 lncRNA 737 4

Ensembl: ENST00000517454 (view in UCSC) ,

LncBook: HSALNT0133572,

LNCipedia: lnc-PDGFRL-1:1,

NONCODE: NONHSAT125288.2,

URS00009BCBC5_9606 lncRNA 735 2

LncBook: HSALNT0133573,

NONCODE: NONHSAT215471.1,

URS0001BCD303_9606 lncRNA 1795 1

LncBook: HSALNT0133571,

URS0001BD5239_9606 lncRNA 735 1

LncBook: HSALNT0133572,

URS0001BE412E_9606 lncRNA 735 1

LncBook: HSALNT0133573,

ENSG00000253168 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253168 Gene

No ASD Table

Relevant External Links for ENSG00000253168 Gene

GeneLoc Exon Structure for
ENSG00000253168

No data available for mRNA/cDNA for ENSG00000253168 Gene

Expression for ENSG00000253168 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000253168 Gene

genes like me logo Genes that share expression patterns with ENSG00000253168: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253168 Gene

Orthologs for ENSG00000253168 Gene

Evolution for ENSG00000253168 Gene

ENSEMBL:
Gene Tree for ENSG00000253168 (if available)
TreeFam:
Gene Tree for ENSG00000253168 (if available)

No data available for Orthologs for ENSG00000253168 Gene

Paralogs for ENSG00000253168 Gene

No data available for Paralogs for ENSG00000253168 Gene

Variants for ENSG00000253168 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253168 Gene

Disorders for ENSG00000253168 Gene

No disorders were found for ENSG00000253168 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253168 Gene

Publications for ENSG00000253168 Gene

No publications were found for ENSG00000253168 Gene.

No data available for Mastermind for ENSG00000253168 Gene

Products for ENSG00000253168 Gene

Sources for ENSG00000253168 Gene