Aliases for ENSG00000253072 Gene

Data sources for ENSG00000253072 Gene:

Subcategory (RNA class) for ENSG00000253072 Gene

snoRNA

Aliases for ENSG00000253072 Gene

External Ids for ENSG00000253072 Gene

Summaries for ENSG00000253072 Gene

GeneCards Summary for ENSG00000253072 Gene

ENSG00000253072 is an RNA Gene, and is affiliated with the snoRNA class.

Additional gene information for ENSG00000253072 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000253072 Gene

Genomics for ENSG00000253072 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000253072 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J015577 Enhancer 1.2 FANTOM5 Ensembl ENCODE 10.3 -97.0 -97008 7 HES1 REST TAL1 RXRA FOXA2 ZFP91 ZNF316 FOSL1 SPI1 NFE2 lnc-SOX6-6 INSC ENSG00000253072 ENSG00000254789 piR-55985-023 LINC02751 LOC105376568
GH11J015507 Enhancer 0.5 ENCODE 11.5 -25.8 -25794 1.2 FEZF1 EBF1 USF2 FOXA1 ZNF189 RAD51 GLIS1 KLF1 ZNF335 ENSG00000253072 HSALNG0082860 HSALNG0082856 INSC
GH11J015446 Enhancer 0.3 Ensembl 10.8 +35.2 35192 0.2 RAD51 TOE1 CYP2R1 COPB1 ENSG00000253072 piR-32470-011 HSALNG0082854 INSC
GH11J015519 Enhancer 0.2 Ensembl 10.9 -38.2 -38208 0.6 ENSG00000253072 HSALNG0082860 HSALNG0082863 INSC
GH11J015470 Enhancer 0.8 Ensembl ENCODE 0.4 +9.3 9290 3.6 BCL11A SPI1 BATF PKNOX1 ATF2 RCOR1 GATA2 HNF4A POU5F1 IKZF1 ENSG00000253072 piR-32470-011 HSALNG0082854 INSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000253072 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000253072 Gene

Latest Assembly
chr11:15,481,808-15,481,893
(GRCh38/hg38)
Size:
86 bases
Orientation:
Minus strand

Previous Assembly
chr11:15,503,354-15,503,439
(GRCh37/hg19 by Ensembl)
Size:
86 bases
Orientation:
Minus strand

Genomic View for ENSG00000253072 Gene

Genes around ENSG00000253072 on UCSC Golden Path with GeneCards custom track
ENSG00000253072 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000253072 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000253072 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000253072 Gene

Proteins for ENSG00000253072 Gene

Post-translational modifications for ENSG00000253072 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000253072 Gene

Domains & Families for ENSG00000253072 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000253072 Gene

Function for ENSG00000253072 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000253072 Gene

Localization for ENSG00000253072 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000253072 Gene

Pathways & Interactions for ENSG00000253072 Gene

PathCards logo

SuperPathways for ENSG00000253072 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000253072 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000253072 Gene

Drugs & Compounds for ENSG00000253072 Gene

No Compound Related Data Available

Transcripts for ENSG00000253072 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000253072 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS0000AA595F_9606 snoRNA 86 2

Ensembl: ENST00000517263 (view in UCSC) ,

snoDB: SNODB1498,

ENSG00000253072 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000253072 Gene

No ASD Table

Relevant External Links for ENSG00000253072 Gene

GeneLoc Exon Structure for
ENSG00000253072

No data available for mRNA/cDNA for ENSG00000253072 Gene

Expression for ENSG00000253072 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000253072 Gene

genes like me logo Genes that share expression patterns with ENSG00000253072: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000253072 Gene

Orthologs for ENSG00000253072 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000253072 Gene

Organism Taxonomy Gene Similarity Type Details
Chimpanzee
(Pan troglodytes)
Mammalia snoMBII-202 31
  • 96 (a)
OneToOne
Oppossum
(Monodelphis domestica)
Mammalia snoMBII-202 31
  • 57 (a)
ManyToMany
Chicken
(Gallus gallus)
Aves snoMBII-202 31
  • 61 (a)
OneToOne
Lizard
(Anolis carolinensis)
Reptilia snoMBII-202 31
  • 65 (a)
OneToOne
Zebrafish
(Danio rerio)
Actinopterygii snoMBII-202 31
  • 58 (a)
ManyToMany
Species where no ortholog for ENSG00000253072 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Eremothecium gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • Alpha proteobacteria (Wolbachia pipientis)
  • Amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • Baker's yeast (Saccharomyces cerevisiae)
  • Barley (Hordeum vulgare)
  • Beta proteobacteria (Neisseria meningitidis)
  • Bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • Common water flea (Daphnia pulex)
  • Corn (Zea mays)
  • Cow (Bos Taurus)
  • Dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • Filamentous fungi (Aspergillus nidulans)
  • Firmicute Bacteria (Streptococcus pneumoniae)
  • Fission Yeast (Schizosaccharomyces pombe)
  • Fruit Fly (Drosophila melanogaster)
  • Green Algae (Chlamydomonas reinhardtii)
  • Honey Bee (Apis mellifera)
  • K. Lactis Yeast (Kluyveromyces lactis)
  • Loblloly Pine (Pinus taeda)
  • Malaria Parasite (Plasmodium falciparum)
  • Medicago Trunc (Medicago Truncatula)
  • Moss (Physcomitrella patens)
  • Mouse (Mus musculus)
  • Orangutan (Pongo pygmaeus)
  • Pig (Sus scrofa)
  • Platypus (Ornithorhynchus anatinus)
  • Rainbow Trout (Oncorhynchus mykiss)
  • Rat (Rattus norvegicus)
  • Rice (Oryza sativa)
  • Rice Blast Fungus (Magnaporthe grisea)
  • Schistosome Parasite (Schistosoma mansoni)
  • Sea Anemone (Nematostella vectensis)
  • Sea Vase (Ciona intestinalis)
  • Sea Squirt (Ciona savignyi)
  • Sea Urchin (Strongylocentrotus purpuratus)
  • Sorghum (Sorghum bicolor)
  • Soybean (Glycine max)
  • Stem Rust Fungus (Puccinia graminis)
  • Sugarcane (Saccharum officinarum)
  • Thale Cress (Arabidopsis thaliana)
  • Tomato (Lycopersicon esculentum)
  • Toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • Tropical Clawed Frog (Silurana tropicalis)
  • Wheat (Triticum aestivum)
  • Worm (Caenorhabditis elegans)

Evolution for ENSG00000253072 Gene

ENSEMBL:
Gene Tree for ENSG00000253072 (if available)
TreeFam:
Gene Tree for ENSG00000253072 (if available)

Paralogs for ENSG00000253072 Gene

No data available for Paralogs for ENSG00000253072 Gene

Variants for ENSG00000253072 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000253072 Gene

Disorders for ENSG00000253072 Gene

No disorders were found for ENSG00000253072 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000253072 Gene

Publications for ENSG00000253072 Gene

No publications were found for ENSG00000253072 Gene.

No data available for Mastermind for ENSG00000253072 Gene

Products for ENSG00000253072 Gene

Sources for ENSG00000253072 Gene