Aliases for ENSG00000252660 Gene

Subcategory (RNA class) for ENSG00000252660 Gene

misc_RNA

Number of RNA Genes sources:

1 / 14

Aliases for ENSG00000252660 Gene

  • RF00019 172
  • Y RNA 5
  • Y_RNA 5

External Ids for ENSG00000252660 Gene

Previous GeneCards Identifiers for ENSG00000252660 Gene

  • GC12P063329

Summaries for ENSG00000252660 Gene

GeneCards Summary for ENSG00000252660 Gene

ENSG00000252660 is an RNA Gene, and is affiliated with the misc_RNA class.

Rfam classification for ENSG00000252660 Gene

Additional gene information for ENSG00000252660 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for ENSG00000252660 Gene

Genomics for ENSG00000252660 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000252660 Gene

Promoters and enhancers for ENSG00000252660 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J062933 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE CraniofacialAtlas dbSUPER 500.7 -1.3 -1304 3.2 EP300 ZNF217 CTCF MYC TCF12 USF1 POLR2G TEAD4 ZFX ZNF639 ENSG00000252660 PPM1H hsa-miR-5095-093 RXYLT1
GH12J062936 Promoter/Enhancer 0.6 Ensembl dbSUPER 500.7 +0.4 400 0.2 FOXA1 ENSG00000252660 PPM1H ENSG00000257779 RPL14P1
GH12J062910 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -21.1 -21101 8 ZNF217 CTCF USF1 PHB2 SIX5 ZBTB11 AFF1 TARDBP REST HES1 PPM1H ENSG00000252660 RNU1-83P piR-50444-080 hsa-miR-5095-093
GH12J062898 Enhancer 1.4 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -34.6 -34601 7.4 FOXK2 ZNF217 NCOR1 KDM6A TCF7 AFF1 RFX1 CUX1 TGIF2 SKI piR-50444-080 PPM1H ENSG00000252660 RNU1-83P RF00003-020
GH12J062891 Enhancer 1.2 Ensembl ENCODE dbSUPER 11.6 -43.0 -43000 2.2 NCOR1 TCF7 TGIF2 SKI TEAD1 TBX3 ZKSCAN8 FOXA2 CEBPB TCF7L2 RNU1-83P PPM1H ENSG00000252660 MON2 DPY19L2 piR-50444-080 RF00003-020 LOC105369795
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000252660 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000252660 Gene

Genomic Locations for ENSG00000252660 Gene
chr12:62,935,701-62,935,802
(GRCh38/hg38)
Size:
102 bases
Orientation:
Plus strand
chr12:63,329,481-63,329,582
(GRCh37/hg19)
Size:
102 bases
Orientation:
Plus strand

Genomic View for ENSG00000252660 Gene

Genes around ENSG00000252660 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000252660 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000252660 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000252660 Gene

Proteins for ENSG00000252660 Gene

Post-translational modifications for ENSG00000252660 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000252660 Gene

Domains & Families for ENSG00000252660 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000252660 Gene

Function for ENSG00000252660 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000252660 Gene

Localization for ENSG00000252660 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000252660 Gene

Pathways & Interactions for ENSG00000252660 Gene

PathCards logo

SuperPathways for ENSG00000252660 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000252660 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000252660 Gene

Drugs & Compounds for ENSG00000252660 Gene

No Compound Related Data Available

Transcripts for ENSG00000252660 Gene

mRNA/cDNA for ENSG00000252660 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
1 Rfam transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000252660 Gene

No ASD Table

Relevant External Links for ENSG00000252660 Gene

GeneLoc Exon Structure for
ENSG00000252660

Expression for ENSG00000252660 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000252660 Gene

genes like me logo Genes that share expression patterns with ENSG00000252660: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000252660 Gene

Orthologs for ENSG00000252660 Gene

This gene was present in the common ancestor of mammals.

Orthologs for ENSG00000252660 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia Y_RNA 31
  • 100 (a)
OneToOne
dog
(Canis familiaris)
Mammalia Y_RNA 31
  • 90 (a)
OneToOne
Species where no ortholog for ENSG00000252660 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for ENSG00000252660 Gene

ENSEMBL:
Gene Tree for ENSG00000252660 (if available)
TreeFam:
Gene Tree for ENSG00000252660 (if available)

Paralogs for ENSG00000252660 Gene

No data available for Paralogs for ENSG00000252660 Gene

Variants for ENSG00000252660 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000252660 Gene

Disorders for ENSG00000252660 Gene

No disorders were found for ENSG00000252660 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000252660 Gene

Publications for ENSG00000252660 Gene

No publications were found for ENSG00000252660 Gene.

No data available for Mastermind for ENSG00000252660 Gene

Products for ENSG00000252660 Gene

Sources for ENSG00000252660 Gene