Free for academic non-profit institutions. Other users need a Commercial license

Aliases for ENSG00000252329 Gene

Subcategory (RNA class) for ENSG00000252329 Gene

scaRNA

Quality Score for this RNA gene is

13

Aliases for ENSG00000252329 Gene

  • RF00424 5

External Ids for ENSG00000252329 Gene

ORGUL Members for ENSG00000252329 Gene

Previous GeneCards Identifiers for ENSG00000252329 Gene

  • GC11M012926

Summaries for ENSG00000252329 Gene

GeneCards Summary for ENSG00000252329 Gene

ENSG00000252329 is an RNA Gene, and is affiliated with the scaRNA class.

Additional gene information for ENSG00000252329 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000252329 Gene

Genomics for ENSG00000252329 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000252329 Gene

Promoters and enhancers for ENSG00000252329 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J013007 Promoter/Enhancer 1.7 Ensembl ENCODE dbSUPER 9.8 -105.3 -105318 6.5 ZNF652 SP1 ELF3 CEBPG RERE ZNF687 MAFK TFE3 RELA SP7 RASSF10 RASSF10-DT LINC00958 ENSG00000252329 GC11P013015
GH11J012843 Enhancer 1.6 VISTA ENCODE dbSUPER 10.3 +58.9 58873 4.7 ELF3 MNT CBFA2T2 ZNF148 CEBPG RERE AHR TFE3 SP7 HNF1A ENSG00000254688 TEAD1 ENSG00000252329 ENSG00000255067
GH11J012798 Enhancer 1.5 FANTOM5 ENCODE dbSUPER 10.1 +102.3 102291 8.8 ELF3 CBFA2T2 CEBPG RERE CSDE1 ZSCAN21 NCOA3 ZNF24 MAFK TFE3 GC11P012801 TEAD1 ENSG00000254688 ENSG00000252329 GC11P012807
GH11J012852 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 10.3 +50.4 50417 4.5 ZNF652 CC2D1A ELF3 CBFA2T2 TRIM24 SP7 SP1 HNF1A SMARCA4 MTA1 ENSG00000254688 TEAD1 ENSG00000252329 ENSG00000255067 GC11M012886
GH11J012840 Enhancer 1.1 ENCODE dbSUPER 10.4 +63.0 63005 3.3 CC2D1A CBFA2T2 ZNF384 NFIB SP7 PRDM1 MZF1 SMARCA4 MTA1 POLR2A ENSG00000252329 TEAD1 ENSG00000255067 ENSG00000254688
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000252329 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000252329 Gene

Genomic Locations for ENSG00000252329 Gene
chr11:12,904,817-12,904,988
(GRCh38/hg38)
Size:
172 bases
Orientation:
Minus strand
chr11:12,926,364-12,926,535
(GRCh37/hg19)
Size:
172 bases
Orientation:
Minus strand

Genomic View for ENSG00000252329 Gene

Genes around ENSG00000252329 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000252329 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000252329 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000252329 Gene

Proteins for ENSG00000252329 Gene

Post-translational modifications for ENSG00000252329 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000252329 Gene

Domains & Families for ENSG00000252329 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000252329 Gene

Function for ENSG00000252329 Gene

Phenotypes From GWAS Catalog for ENSG00000252329 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000252329 Gene

Localization for ENSG00000252329 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000252329 Gene

Pathways & Interactions for ENSG00000252329 Gene

PathCards logo

SuperPathways for ENSG00000252329 Gene

No Data Available

Interacting Proteins for ENSG00000252329 Gene

Gene Ontology (GO) - Biological Process for ENSG00000252329 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000252329 Gene

Drugs & Compounds for ENSG00000252329 Gene

No Compound Related Data Available

Transcripts for ENSG00000252329 Gene

mRNA/cDNA for ENSG00000252329 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000252329 Gene

No ASD Table

Relevant External Links for ENSG00000252329 Gene

GeneLoc Exon Structure for
ENSG00000252329

Expression for ENSG00000252329 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000252329 Gene

genes like me logo Genes that share expression patterns with ENSG00000252329: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000252329 Gene

Orthologs for ENSG00000252329 Gene

This gene was present in the common ancestor of chordates.

Orthologs for ENSG00000252329 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia SCARNA16 35
  • 89 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia SCARNA16 35
  • 68 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia SCARNA16 35
  • 65 (a)
OneToMany
dog
(Canis familiaris)
Mammalia SCARNA16 35
  • 65 (a)
ManyToMany
mouse
(Mus musculus)
Mammalia Gm25434 35
  • 60 (a)
ManyToMany
chicken
(Gallus gallus)
Aves SCARNA16 35
  • 56 (a)
OneToMany
lizard
(Anolis carolinensis)
Reptilia SCARNA16 35
  • 55 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii SCARNA16 35
  • 78 (a)
OneToOne
Species where no ortholog for ENSG00000252329 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for ENSG00000252329 Gene

ENSEMBL:
Gene Tree for ENSG00000252329 (if available)
TreeFam:
Gene Tree for ENSG00000252329 (if available)

Paralogs for ENSG00000252329 Gene

No data available for Paralogs for ENSG00000252329 Gene

Variants for ENSG00000252329 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000252329 Gene

Disorders for ENSG00000252329 Gene

No disorders were found for ENSG00000252329 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000252329 Gene

Publications for ENSG00000252329 Gene

No publications were found for ENSG00000252329 Gene.

No data available for External Links for ENSG00000252329 Gene

Products for ENSG00000252329 Gene

Sources for ENSG00000252329 Gene

Content
Loading form....