Aliases for ENSG00000250976 Gene

Data sources for ENSG00000250976 Gene:

RNA type for ENSG00000250976 Gene

lncRNA

Aliases for ENSG00000250976 Gene

External Ids for ENSG00000250976 Gene

Previous GeneCards Identifiers for ENSG00000250976 Gene

  • GC17M048640

Summaries for ENSG00000250976 Gene

GeneCards Summary for ENSG00000250976 Gene

ENSG00000250976 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000250976 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000250976 Gene

Genomics for ENSG00000250976 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000250976 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J050562 Enhancer 1.2 FANTOM5 Ensembl ENCODE CraniofacialAtlas 250.7 -1.3 -1335 5 ZNF600 SIN3A MAFF MYNN MAFK PRDM10 ZBTB48 ZNF189 RAD51 CTCF ENSG00000250976 SPATA20 MYCBPAP LOC105371824 EPN3 ENSG00000262837 CACNA1G SAMD14 PDK2 AB372778-013
GH17J050683 Promoter/Enhancer 1.9 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.4 -127.2 -127207 14.8 ZNF654 ZNF600 SSRP1 JUND ZNF580 ZMYM3 ATF2 KLF9 CEBPA ZNF10 HSALNG0117331-002 LUC7L3 MBTD1 ENSG00000262837 ABCC3 ANKRD40 EPN3 ENSG00000204584 COL1A1 LOC101927253
GH17J050570 Enhancer 0.8 FANTOM5 Ensembl CraniofacialAtlas 0.4 -6.5 -6537 1.8 ZNF398 ZSCAN4 PKNOX1 ZBTB17 ZFHX2 NR2F1 SPATA20 ENSG00000250976 CACNA1G AB372778-013 ABCC3
GH17J050574 Enhancer 0.3 Ensembl 0.4 -10.8 -10818 0.4 MAFG NR2F1 SPATA20 ENSG00000250976 AB372778-013 CACNA1G ABCC3
GH17J050567 Enhancer 0.2 Ensembl 0.7 -3.9 -3918 0.2 ENSG00000250976 CACNA1G AB372778-013 ABCC3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000250976 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000250976 Gene

Latest Assembly
chr17:50,563,203-50,563,783
(GRCh38/hg38)
Size:
581 bases
Orientation:
Minus strand

Previous Assembly
chr17:48,640,564-48,641,144
(GRCh37/hg19 by Ensembl)
Size:
581 bases
Orientation:
Minus strand

Genomic View for ENSG00000250976 Gene

Genes around ENSG00000250976 on UCSC Golden Path with GeneCards custom track
ENSG00000250976 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000250976 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000250976 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000250976 Gene

Proteins for ENSG00000250976 Gene

Post-translational modifications for ENSG00000250976 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000250976 Gene

Domains & Families for ENSG00000250976 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000250976 Gene

Function for ENSG00000250976 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000250976 Gene

Localization for ENSG00000250976 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000250976 Gene

Pathways & Interactions for ENSG00000250976 Gene

PathCards logo

SuperPathways for ENSG00000250976 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000250976 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000250976 Gene

Drugs & Compounds for ENSG00000250976 Gene

No Compound Related Data Available

Transcripts for ENSG00000250976 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000250976 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00004B4388_9606 lncRNA 156 1

Ensembl: ENST00000513378 (view in UCSC) ,

ENSG00000250976 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000250976 Gene

No ASD Table

Relevant External Links for ENSG00000250976 Gene

GeneLoc Exon Structure for
ENSG00000250976

No data available for mRNA/cDNA for ENSG00000250976 Gene

Expression for ENSG00000250976 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000250976 Gene

genes like me logo Genes that share expression patterns with ENSG00000250976: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000250976 Gene

Orthologs for ENSG00000250976 Gene

Evolution for ENSG00000250976 Gene

ENSEMBL:
Gene Tree for ENSG00000250976 (if available)
TreeFam:
Gene Tree for ENSG00000250976 (if available)

No data available for Orthologs for ENSG00000250976 Gene

Paralogs for ENSG00000250976 Gene

No data available for Paralogs for ENSG00000250976 Gene

Variants for ENSG00000250976 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000250976 Gene

Disorders for ENSG00000250976 Gene

No disorders were found for ENSG00000250976 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000250976 Gene

Publications for ENSG00000250976 Gene

No publications were found for ENSG00000250976 Gene.

No data available for Mastermind for ENSG00000250976 Gene

Products for ENSG00000250976 Gene

Sources for ENSG00000250976 Gene