Aliases for ENSG00000250957 Gene

Subcategory (RNA class) for ENSG00000250957 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000250957 Gene

  • Novel Transcript 5
  • NONHSAG039372 92
  • HSALNG0038623 167
  • Lnc-FBXO8-3 168
  • AC012055.1 5

External Ids for ENSG00000250957 Gene

Previous GeneCards Identifiers for ENSG00000250957 Gene

  • GC04M175056

Summaries for ENSG00000250957 Gene

GeneCards Summary for ENSG00000250957 Gene

ENSG00000250957 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000250957 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000250957 Gene

Genomics for ENSG00000250957 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000250957 Gene

Promoters and enhancers for ENSG00000250957 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J174154 Promoter/Enhancer 1 Ensembl dbSUPER 500.7 +0.1 136 0.6 JUND FOS JUN FOSL1 IRF1 FOSL2 NFE2 IRF2 NR3C1 HDAC2 ENSG00000250957 LINC02268 lnc-CEP44-2 lnc-CEP44-7
GH04J174152 Enhancer 0.7 Ensembl dbSUPER 500.7 +1.8 1836 0.8 WT1 ZNF316 GATA3 ZNF335 JUND CSDE1 IKZF1 ENSG00000250957 LINC02268 lnc-CEP44-2 lnc-CEP44-7
GH04J174120 Promoter/Enhancer 1.7 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.3 +34.4 34436 1.2 CTCF NRF1 REST ZBTB26 HES1 RAD21 TRIM22 TEAD1 MCM3 MXI1 LINC02268 CEP44 HMGB2 ENSG00000261646 HAND2-AS1 ENSG00000250957 lnc-CEP44-2 lnc-CEP44-7
GH04J174133 Enhancer 1 UCNEbase dbSUPER 0.4 +20.9 20927 0.2 OSR2 WT1 OVOL3 IKZF3 ZNF843 BCL11B POLR2A FOXP2 PRDM6 ZNF18 ENSG00000250957 lnc-CEP44-2 LINC02268 lnc-CEP44-7
GH04J174119 Enhancer 0.7 Ensembl dbSUPER 0.3 +35.3 35345 0.5 JUND MXI1 FOSL1 FOS CEBPB ZBTB33 MAX ATF3 YY1 GATA2 lnc-CEP44-2 ENSG00000250957 LINC02268 lnc-CEP44-7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000250957 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000250957 Gene

Genomic Locations for ENSG00000250957 Gene
chr4:174,135,055-174,154,637
(GRCh38/hg38)
Size:
19,583 bases
Orientation:
Minus strand
chr4:175,056,206-175,075,788
(GRCh37/hg19)
Size:
19,583 bases
Orientation:
Minus strand

Genomic View for ENSG00000250957 Gene

Genes around ENSG00000250957 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000250957 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000250957 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000250957 Gene

Proteins for ENSG00000250957 Gene

Post-translational modifications for ENSG00000250957 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000250957 Gene

Domains & Families for ENSG00000250957 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000250957 Gene

Function for ENSG00000250957 Gene

Phenotypes From GWAS Catalog for ENSG00000250957 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000250957 Gene

Localization for ENSG00000250957 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000250957 Gene

Pathways & Interactions for ENSG00000250957 Gene

PathCards logo

SuperPathways for ENSG00000250957 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000250957 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000250957 Gene

Drugs & Compounds for ENSG00000250957 Gene

No Compound Related Data Available

Transcripts for ENSG00000250957 Gene

mRNA/cDNA for ENSG00000250957 Gene

2 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
2 NONCODE transcripts :
1 LncBook transcripts :
1 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000250957 Gene

No ASD Table

Relevant External Links for ENSG00000250957 Gene

GeneLoc Exon Structure for
ENSG00000250957

Expression for ENSG00000250957 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000250957 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000250957 Gene

This gene is overexpressed in Colon - Sigmoid (x6.7), Esophagus - Gastroesophageal Junction (x5.8), Esophagus - Muscularis (x5.4), and Heart - Atrial Appendage (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000250957: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000250957 Gene

Orthologs for ENSG00000250957 Gene

Evolution for ENSG00000250957 Gene

ENSEMBL:
Gene Tree for ENSG00000250957 (if available)
TreeFam:
Gene Tree for ENSG00000250957 (if available)

No data available for Orthologs for ENSG00000250957 Gene

Paralogs for ENSG00000250957 Gene

No data available for Paralogs for ENSG00000250957 Gene

Variants for ENSG00000250957 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000250957 Gene

Disorders for ENSG00000250957 Gene

No disorders were found for ENSG00000250957 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000250957 Gene

Publications for ENSG00000250957 Gene

No publications were found for ENSG00000250957 Gene.

No data available for Mastermind for ENSG00000250957 Gene

Products for ENSG00000250957 Gene

Sources for ENSG00000250957 Gene