Aliases for ENSG00000250957 Gene

Data sources for ENSG00000250957 Gene:

Subcategory (RNA class) for ENSG00000250957 Gene

lncRNA

Aliases for ENSG00000250957 Gene

External Ids for ENSG00000250957 Gene

Previous GeneCards Identifiers for ENSG00000250957 Gene

  • GC04M175056

Summaries for ENSG00000250957 Gene

GeneCards Summary for ENSG00000250957 Gene

ENSG00000250957 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000250957 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000250957 Gene

Genomics for ENSG00000250957 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000250957 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J174198 Enhancer 1.2 UCNEbase Ensembl ENCODE 0.7 -4.4 -4431 1 ZNF316 MAFK JUND MAFG TEAD4 RCOR1 CREM DPF2 TRIM28 POLR2A ENSG00000250957 HSALNG0038628 LINC02268 ENSG00000251213 FBXO8 HAND2
GH04J174154 Promoter/Enhancer 1 Ensembl dbSUPER 0.3 +40.1 40069 0.8 IKZF1 IRF2 FOSL1 JUND NFE2 HDAC2 ZNF664 GATA2 HDAC1 ARID1B HSALNG0038627 ENSG00000250957 LOC107986204 LINC02268 lnc-CEP44-2 FBXO8 lnc-CEP44-7 HAND2
GH04J174152 Enhancer 0.7 Ensembl dbSUPER 0.3 +41.9 41869 0.8 IKZF1 ZNF316 JUND CSDE1 EP300 ZNF335 WT1 HSALNG0038627 ENSG00000250957 LOC107986204 LINC02268 lnc-CEP44-2 FBXO8 lnc-CEP44-7 HAND2
GH04J174204 Enhancer 0.4 Ensembl 0.4 -9.6 -9631 0.2 RCOR1 EZH2 IKZF1 ENSG00000250957 HSALNG0038628 LINC02268 ENSG00000251213 FBXO8 HAND2
GH04J174210 Enhancer 0.5 Ensembl 0.4 -16.9 -16923 1.2 BHLHE40 ZBTB33 GATA2 EZH2 USF1 CEP44 FBXO8 HSALNG0038628 LINC02268 ENSG00000250957 ENSG00000251213 HAND2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000250957 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000250957 Gene

Latest Assembly
chr4:174,134,530-174,194,670
(GRCh38/hg38)
Size:
60,141 bases
Orientation:
Minus strand

Previous Assembly
chr4:175,056,206-175,075,788
(GRCh37/hg19 by Ensembl)
Size:
19,583 bases
Orientation:
Minus strand

Genomic View for ENSG00000250957 Gene

Genes around ENSG00000250957 on UCSC Golden Path with GeneCards custom track
ENSG00000250957 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000250957 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000250957 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000250957 Gene

Proteins for ENSG00000250957 Gene

Post-translational modifications for ENSG00000250957 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000250957 Gene

Domains & Families for ENSG00000250957 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000250957 Gene

Function for ENSG00000250957 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000250957 Gene

Localization for ENSG00000250957 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000250957 Gene

Pathways & Interactions for ENSG00000250957 Gene

PathCards logo

SuperPathways for ENSG00000250957 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000250957 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000250957 Gene

Drugs & Compounds for ENSG00000250957 Gene

No Compound Related Data Available

Transcripts for ENSG00000250957 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000250957 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00003A5240_9606 lncRNA 1146 3

Ensembl: ENST00000511346 (view in UCSC) ,

LNCipedia: lnc-FBXO8-3:1,

NONCODE: NONHSAT099313.2,

URS00009C0DED_9606 lncRNA 1144 2

LncBook: HSALNT0081082,

NONCODE: NONHSAT200703.1,

URS0001BD37E8_9606 lncRNA 3372 1

LncBook: HSALNT0081075,

URS0001BE0910_9606 lncRNA 1821 1

LncBook: HSALNT0081079,

URS0001BD92A3_9606 lncRNA 1731 1

LncBook: HSALNT0081078,

ENSG00000250957 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000250957 Gene

No ASD Table

Relevant External Links for ENSG00000250957 Gene

GeneLoc Exon Structure for
ENSG00000250957

No data available for mRNA/cDNA for ENSG00000250957 Gene

Expression for ENSG00000250957 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000250957 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000250957 Gene

This gene is overexpressed in Colon - Sigmoid (x6.7), Esophagus - Gastroesophageal Junction (x5.8), Esophagus - Muscularis (x5.4), and Heart - Atrial Appendage (x4.3).
genes like me logo Genes that share expression patterns with ENSG00000250957: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000250957 Gene

Orthologs for ENSG00000250957 Gene

Evolution for ENSG00000250957 Gene

ENSEMBL:
Gene Tree for ENSG00000250957 (if available)
TreeFam:
Gene Tree for ENSG00000250957 (if available)

No data available for Orthologs for ENSG00000250957 Gene

Paralogs for ENSG00000250957 Gene

No data available for Paralogs for ENSG00000250957 Gene

Variants for ENSG00000250957 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000250957 Gene

Disorders for ENSG00000250957 Gene

Additional Disease Information for ENSG00000250957

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000250957 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000250957 Gene

Publications for ENSG00000250957 Gene

No publications were found for ENSG00000250957 Gene.

No data available for Mastermind for ENSG00000250957 Gene

Products for ENSG00000250957 Gene

Sources for ENSG00000250957 Gene