Aliases for ENSG00000249753 Gene

Data sources for ENSG00000249753 Gene:

RNA type for ENSG00000249753 Gene

lncRNA

Aliases for ENSG00000249753 Gene

External Ids for ENSG00000249753 Gene

Previous GeneCards Identifiers for ENSG00000249753 Gene

  • GC01P017757
  • GC12M064017

Summaries for ENSG00000249753 Gene

GeneCards Summary for ENSG00000249753 Gene

ENSG00000249753 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000249753 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000249753 Gene

Genomics for ENSG00000249753 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000249753 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J063795 Enhancer 0.3 Ensembl 250.7 +0.4 417 0.2 USF2 USF1 ENSG00000249753 RXYLT1 RF00994-244 NONHSAG011517.2 SRGAP1
GH12J063779 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 +15.3 15317 2.8 BCLAF1 SP1 ZNF207 ZNF600 MYC IKZF1 ZNF580 POLR2A ZNF223 YY1 RXYLT1 NONHSAG011517.2 PABPC1P4 ENSG00000255566 RF00994-244 ENSG00000249753 SRGAP1
GH12J063805 Enhancer 0.7 Ensembl 0.4 -10.6 -10583 0.2 CEBPA JUND FOXA1 FOXA2 ZNF623 RXRA RARA ZBTB33 FOXP1 PKNOX1 RXYLT1 ENSG00000255629 RNU6-1009P ENSG00000249753 PABPC1P4 RXYLT1-AS1 SRGAP1
GH12J063814 Enhancer 0.7 Ensembl ENCODE 0.4 -19.1 -19082 1.6 TRIM22 ELF1 JUNB IKZF1 IKZF2 RUNX3 RELB SP1 RXYLT1 DPY19L2 PABPC1P4 RXYLT1-AS1 ENSG00000249753 SRGAP1
GH12J063667 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE CraniofacialAtlas 0.1 +128.1 128117 4 ZNF600 ZNF580 ZNF223 ZIC2 ZBTB10 ZNF341 ZNF513 KLF9 ZNF610 SP2 DPY19L2 lnc-DPY19L2-3 piR-48175 ENSG00000255583 piR-30214-001 ENSG00000249753 AVPR1A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000249753 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000249753 Gene

Latest Assembly
chr12:63,623,787-63,795,718
(GRCh38/hg38)
Size:
171,932 bases
Orientation:
Minus strand

Previous Assembly
chr12:64,017,568-64,189,498
(GRCh37/hg19 by Ensembl)
Size:
171,931 bases
Orientation:
Minus strand

Genomic View for ENSG00000249753 Gene

Genes around ENSG00000249753 on UCSC Golden Path with GeneCards custom track
ENSG00000249753 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000249753 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000249753 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000249753 Gene

Proteins for ENSG00000249753 Gene

Post-translational modifications for ENSG00000249753 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000249753 Gene

Domains & Families for ENSG00000249753 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000249753 Gene

Function for ENSG00000249753 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000249753 Gene

Localization for ENSG00000249753 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000249753 Gene

Pathways & Interactions for ENSG00000249753 Gene

PathCards logo

SuperPathways for ENSG00000249753 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000249753 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000249753 Gene

Drugs & Compounds for ENSG00000249753 Gene

No Compound Related Data Available

Transcripts for ENSG00000249753 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000249753 Gene

RNAcentral Transcript ID RNA Type Length (nts) # of Sources Source Identifiers and Annotations
URS00005FBE10_9606 lncRNA 277 2

Ensembl: ENST00000509615 (view in UCSC) ,

LNCipedia: lnc-DPY19L2-1:1,

ENSG00000249753 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000249753 Gene

No ASD Table

Relevant External Links for ENSG00000249753 Gene

GeneLoc Exon Structure for
ENSG00000249753

No data available for mRNA/cDNA for ENSG00000249753 Gene

Expression for ENSG00000249753 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000249753 Gene

genes like me logo Genes that share expression patterns with ENSG00000249753: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000249753 Gene

Orthologs for ENSG00000249753 Gene

Evolution for ENSG00000249753 Gene

ENSEMBL:
Gene Tree for ENSG00000249753 (if available)
TreeFam:
Gene Tree for ENSG00000249753 (if available)

No data available for Orthologs for ENSG00000249753 Gene

Paralogs for ENSG00000249753 Gene

No data available for Paralogs for ENSG00000249753 Gene

Variants for ENSG00000249753 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000249753 Gene

Disorders for ENSG00000249753 Gene

Additional Disease Information for ENSG00000249753

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000249753 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000249753 Gene

Publications for ENSG00000249753 Gene

No publications were found for ENSG00000249753 Gene.

No data available for Mastermind for ENSG00000249753 Gene

Products for ENSG00000249753 Gene

Sources for ENSG00000249753 Gene