Aliases for ENSG00000248349 Gene

Aliases for ENSG00000248349 Gene

  • Calcyphosine-Like (CAPSL) Pseudogene 5
  • AC112204.1 5

External Ids for ENSG00000248349 Gene

Summaries for ENSG00000248349 Gene

GeneCards Summary for ENSG00000248349 Gene

ENSG00000248349 is a Pseudogene.

Additional gene information for ENSG00000248349 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000248349 Gene

Genomics for ENSG00000248349 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000248349 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05J035896 Enhancer 0.3 dbSUPER 600.7 -1.2 -1203 1.1 BRF2 ENSG00000248349 ENSG00000279737 NIPBL piR-59297-540 IL7R CAPSL
GH05J035899 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.4 -5.0 -5011 4.6 POLR2A IKZF2 TRIM22 PKNOX1 EED DPF2 RELB JUND RUNX3 FOS ENSG00000248969 IL7R ENSG00000250155 ENSG00000248349 piR-59297-540 CAPSL
GH05J035903 Enhancer 0.8 Ensembl dbSUPER 0.4 -8.5 -8547 0.7 IKZF2 YY1 PKNOX1 EED RELB RUNX3 ARNT ELF1 NBN IKZF1 CAPSL ENSG00000248969 ENSG00000249748 ENSG00000248349 piR-59297-540 IL7R
GH05J035908 Enhancer 0.7 Ensembl ENCODE dbSUPER 0.4 -12.5 -12522 1.2 SPI1 GATA2 CAPSL ENSG00000249748 piR-59297-540 ENSG00000248349 IL7R
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000248349 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000248349 Gene

Genomic Locations for ENSG00000248349 Gene
chr5:35,896,188-35,896,290
(GRCh38/hg38)
Size:
103 bases
Orientation:
Minus strand
chr5:35,896,290-35,896,392
(GRCh37/hg19)
Size:
103 bases
Orientation:
Minus strand

Genomic View for ENSG00000248349 Gene

Genes around ENSG00000248349 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000248349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000248349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000248349 Gene

Proteins for ENSG00000248349 Gene

Post-translational modifications for ENSG00000248349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000248349 Gene

Domains & Families for ENSG00000248349 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000248349 Gene

Function for ENSG00000248349 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000248349 Gene

Localization for ENSG00000248349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000248349 Gene

Pathways & Interactions for ENSG00000248349 Gene

PathCards logo

SuperPathways for ENSG00000248349 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000248349 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000248349 Gene

Drugs & Compounds for ENSG00000248349 Gene

No Compound Related Data Available

Transcripts for ENSG00000248349 Gene

mRNA/cDNA for ENSG00000248349 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000248349 Gene

No ASD Table

Relevant External Links for ENSG00000248349 Gene

GeneLoc Exon Structure for
ENSG00000248349

Expression for ENSG00000248349 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000248349 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000248349 Gene

This gene is overexpressed in Pituitary (x33.9), Fallopian Tube (x7.3), Brain - Hypothalamus (x4.2), and Brain - Anterior cingulate cortex (BA24) (x4.1).
genes like me logo Genes that share expression patterns with ENSG00000248349: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000248349 Gene

Orthologs for ENSG00000248349 Gene

Evolution for ENSG00000248349 Gene

ENSEMBL:
Gene Tree for ENSG00000248349 (if available)
TreeFam:
Gene Tree for ENSG00000248349 (if available)

No data available for Orthologs for ENSG00000248349 Gene

Paralogs for ENSG00000248349 Gene

No data available for Paralogs for ENSG00000248349 Gene

Variants for ENSG00000248349 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000248349 Gene

Disorders for ENSG00000248349 Gene

No disorders were found for ENSG00000248349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000248349 Gene

Publications for ENSG00000248349 Gene

No publications were found for ENSG00000248349 Gene.

No data available for Mastermind for ENSG00000248349 Gene

Products for ENSG00000248349 Gene

Sources for ENSG00000248349 Gene