Aliases for ENSG00000247934 Gene

Data sources for ENSG00000247934 Gene:

Subcategory (RNA class) for ENSG00000247934 Gene

lncRNA

Aliases for ENSG00000247934 Gene

External Ids for ENSG00000247934 Gene

Previous GeneCards Identifiers for ENSG00000247934 Gene

  • GC15M059211
  • GC12M028316
  • GC12M028164

Summaries for ENSG00000247934 Gene

GeneCards Summary for ENSG00000247934 Gene

ENSG00000247934 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000247934 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000247934 Gene

Genomics for ENSG00000247934 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000247934 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J028189 Promoter/Enhancer 2.1 Ensembl ENCODE CraniofacialAtlas dbSUPER 250.7 -0.2 -218 3.3 ZSCAN16 TBP ZBTB10 MXD4 NR2C1 MNT IKZF1 SMAD5 ETS1 ZFP64 ENSG00000247934 LOC729291 lnc-KLHL42-5 CCDC91 piR-56759-111 FAR2
GH12J028242 Enhancer 1.1 Ensembl ENCODE 7.1 -52.2 -52201 1.9 TBP MNT IKZF1 HES1 MBD2 BHLHE40 REST ZNF395 NFATC3 VEZF1 ENSG00000247934 ENSG00000273989 piR-50444-076 lnc-KLHL42-5 CCDC91 FAR2
GH12J028222 Enhancer 0.7 Ensembl ENCODE 6.9 -32.4 -32363 3.8 IRF4 SPI1 BATF ZNF24 ATF4 ZNF133 JUNB RUNX3 ETV6 HMBOX1 CCDC91 ENSG00000247934 ENSG00000273989 piR-30957 lnc-KLHL42-5 FAR2
GH12J028868 Enhancer 0.8 Ensembl ENCODE 4.3 -679.5 -679463 3.6 FEZF1 ZIC2 ZNF843 PRDM6 SPI1 MAFK MYC JUND NFE2 GLIS1 ENSG00000247934 piR-60272-001 piR-52294-034 ENSG00000256513 FAR2 CCDC91
GH12J028872 Enhancer 0.7 Ensembl ENCODE 4.3 -682.1 -682135 1.2 CTCF REST TRIM22 SMC3 RAD21 ZNF143 ZNF660 ZNF24 KLF16 ZNF654 ENSG00000247934 piR-60272-001 piR-52294-034 ENSG00000256513 FAR2 CCDC91
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000247934 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000247934 Gene

Latest Assembly
chr12:28,163,297-28,190,738
(GRCh38/hg38)
Size:
27,442 bases
Orientation:
Minus strand

Previous Assembly
chr12:28,316,231-28,343,299
(GRCh37/hg19 by Ensembl)
Size:
27,069 bases
Orientation:
Minus strand

Genomic View for ENSG00000247934 Gene

Genes around ENSG00000247934 on UCSC Golden Path with GeneCards custom track
ENSG00000247934 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000247934 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000247934 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000247934 Gene

Proteins for ENSG00000247934 Gene

Post-translational modifications for ENSG00000247934 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000247934 Gene

Domains & Families for ENSG00000247934 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000247934 Gene

Function for ENSG00000247934 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000247934 Gene

Localization for ENSG00000247934 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000247934 Gene

Pathways & Interactions for ENSG00000247934 Gene

PathCards logo

SuperPathways for ENSG00000247934 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000247934 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000247934 Gene

Drugs & Compounds for ENSG00000247934 Gene

No Compound Related Data Available

Transcripts for ENSG00000247934 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000247934 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00007647C3_9606 lncRNA 2410 4

Ensembl: ENST00000617468 (view in UCSC) ,

LncBook: HSALNT0187118,

LNCipedia: lnc-PTHLH-1:2,

NONCODE: NONHSAT027469.2,

URS0000027A8B_9606 lncRNA 739 3

Ensembl: ENST00000473753 (view in UCSC) ,

LNCipedia: lnc-PTHLH-1:1,

NONCODE: NONHSAT027467.2,

URS0000D579A1_9606 lncRNA 860 2

LncBook: HSALNT0187108,

LNCipedia: lnc-PTHLH-1:7,

URS0000D571DE_9606 lncRNA 504 2

LncBook: HSALNT0187116,

LNCipedia: lnc-PTHLH-1:9,

URS0000D58A36_9606 lncRNA 15042 1

LNCipedia: lnc-PTHLH-1:6,

ENSG00000247934 in the GeneCaRNA (GeneCards ncRNA compendium) hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000247934 Gene

No ASD Table

Relevant External Links for ENSG00000247934 Gene

GeneLoc Exon Structure for
ENSG00000247934

No data available for mRNA/cDNA for ENSG00000247934 Gene

Expression for ENSG00000247934 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000247934 Gene

mRNA expression in normal human tissues for ENSG00000247934 Gene
genes like me logo Genes that share expression patterns with ENSG00000247934: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000247934 Gene

Orthologs for ENSG00000247934 Gene

Evolution for ENSG00000247934 Gene

ENSEMBL:
Gene Tree for ENSG00000247934 (if available)
TreeFam:
Gene Tree for ENSG00000247934 (if available)

No data available for Orthologs for ENSG00000247934 Gene

Paralogs for ENSG00000247934 Gene

No data available for Paralogs for ENSG00000247934 Gene

Variants for ENSG00000247934 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000247934 Gene

Disorders for ENSG00000247934 Gene

Additional Disease Information for ENSG00000247934

Open Targets Platform
Open Targets Platform

No disorders were found for ENSG00000247934 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for ENSG00000247934 Gene

Publications for ENSG00000247934 Gene

No publications were found for ENSG00000247934 Gene.

No data available for Mastermind for ENSG00000247934 Gene

Products for ENSG00000247934 Gene

Sources for ENSG00000247934 Gene