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Aliases for ENSG00000244953 Gene

Quality Score for this RNA gene is

13

Aliases for ENSG00000244953 Gene

  • Novel Transcript 5
  • AC087521.1 5

External Ids for ENSG00000244953 Gene

Summaries for ENSG00000244953 Gene

GeneCards Summary for ENSG00000244953 Gene

ENSG00000244953 is an RNA Gene. Diseases associated with ENSG00000244953 include Pancreatic Cancer and Visual Epilepsy.

Additional gene information for ENSG00000244953 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000244953 Gene

Genomics for ENSG00000244953 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000244953 Gene

Promoters and enhancers for ENSG00000244953 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J043946 Enhancer 1 ENCODE dbSUPER 607.6 -0.3 -292 1.3 TRIM24 ZNF600 REST CTCF HDAC1 ZNF316 ZNF184 CTBP1 MTA3 EHMT2 ENSG00000244953 C11orf96 ENSG00000254409 ALKBH3-AS1 ALKBH3 ENSG00000246250 ACCSL GC11P043987
GH11J043941 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 6.2 +3.6 3619 4.9 ZNF652 ZFX MLLT1 CTCF NCOA6 SP7 KLF14 PRDM1 ZNF639 SMARCA4 SEC14L1P1 ALKBH3 EXT2 ENSG00000254907 TTC17 ACCS ENSG00000254409 ALKBH3-AS1 ENSG00000246250 ENSG00000244953
GH11J044029 Enhancer 0.9 Ensembl ENCODE dbSUPER 6.2 -84.6 -84568 5.3 SP1 RXRA ZNF24 MNT JUND NR2F2 REST ACCS ENSG00000255165 C11orf96 ALKBH3-AS1 ENSG00000254409 ENSG00000244953 EXT2 GC11P043987 ACCSL
GH11J044016 Enhancer 0.8 Ensembl ENCODE dbSUPER 6.5 -70.1 -70095 2.6 ZIC2 ADNP ENSG00000244953 GC11P043987 ACCS ACCSL
GH11J043986 Enhancer 0.9 ENCODE dbSUPER 5.3 -41.5 -41495 4.1 ZNF148 SP1 RXRA ZIC2 MGA JUND HDAC2 FOS ATF3 YY1 GC11P043987 ENSG00000244953 ACCSL ENSG00000254409 ACCS
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000244953 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000244953 Gene

Genomic Locations for ENSG00000244953 Gene
chr11:43,943,787-43,947,206
(GRCh38/hg38)
Size:
3,420 bases
Orientation:
Minus strand
chr11:43,965,337-43,968,756
(GRCh37/hg19)
Size:
3,420 bases
Orientation:
Minus strand

Genomic View for ENSG00000244953 Gene

Genes around ENSG00000244953 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000244953 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000244953 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000244953 Gene

Proteins for ENSG00000244953 Gene

Post-translational modifications for ENSG00000244953 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000244953 Gene

Domains & Families for ENSG00000244953 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000244953 Gene

Function for ENSG00000244953 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000244953 Gene

Localization for ENSG00000244953 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000244953 Gene

Pathways & Interactions for ENSG00000244953 Gene

PathCards logo

SuperPathways for ENSG00000244953 Gene

No Data Available

Interacting Proteins for ENSG00000244953 Gene

Gene Ontology (GO) - Biological Process for ENSG00000244953 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000244953 Gene

Drugs & Compounds for ENSG00000244953 Gene

No Compound Related Data Available

Transcripts for ENSG00000244953 Gene

mRNA/cDNA for ENSG00000244953 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNA Central transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000244953 Gene

No ASD Table

Relevant External Links for ENSG00000244953 Gene

GeneLoc Exon Structure for
ENSG00000244953

Expression for ENSG00000244953 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000244953 Gene

genes like me logo Genes that share expression patterns with ENSG00000244953: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000244953 Gene

Orthologs for ENSG00000244953 Gene

Evolution for ENSG00000244953 Gene

ENSEMBL:
Gene Tree for ENSG00000244953 (if available)
TreeFam:
Gene Tree for ENSG00000244953 (if available)

No data available for Orthologs for ENSG00000244953 Gene

Paralogs for ENSG00000244953 Gene

No data available for Paralogs for ENSG00000244953 Gene

Variants for ENSG00000244953 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000244953 Gene

Disorders for ENSG00000244953 Gene

MalaCards: The human disease database

(2) MalaCards diseases for ENSG00000244953 Gene - From: LncRNADisease

Disorder Aliases PubMed IDs
pancreatic cancer
  • pancreatic carcinoma
visual epilepsy
  • epilepsy, visual
- elite association - COSMIC cancer census association via MalaCards
genes like me logo Genes that share disorders with ENSG00000244953: view

No data available for UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000244953 Gene

Publications for ENSG00000244953 Gene

No publications were found for ENSG00000244953 Gene.

No data available for External Links for ENSG00000244953 Gene

Products for ENSG00000244953 Gene

Sources for ENSG00000244953 Gene

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