Aliases for ENSG00000244619 Gene

Subcategory (RNA class) for ENSG00000244619 Gene

lncRNA

Quality Score for this RNA gene is

12

Aliases for ENSG00000244619 Gene

  • Novel Transcript, Antisense To ITGA10 5
  • HSALNG0006714 169
  • AC243547.1 5

External Ids for ENSG00000244619 Gene

Previous GeneCards Identifiers for ENSG00000244619 Gene

  • GC01P145541
  • GC01M145542

Summaries for ENSG00000244619 Gene

GeneCards Summary for ENSG00000244619 Gene

ENSG00000244619 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000244619 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000244619 Gene

Genomics for ENSG00000244619 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000244619 Gene

Promoters and enhancers for ENSG00000244619 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J145890 Promoter/Enhancer 1.5 Ensembl ENCODE CraniofacialAtlas 750.6 -0.5 -539 3.6 CTCF SREBF1 FOXA1 RBPJ SMARCE1 POLR2A NR2F6 ZNF217 CREB1 MIXL1 ENSG00000244619 lnc-ANKRD35-1 ANKRD35 POLR3C NBPF20 PIAS3 GPR89A TXNIP HSALNG0006715 ITGA10
GH01J145885 Promoter/Enhancer 1.3 Ensembl ENCODE CraniofacialAtlas 0.4 -6.6 -6574 1.9 SP1 MNT ZNF384 PKNOX1 NRF1 PATZ1 SP2 SCRT2 SAP130 TRIM28 ANKRD35 HSALNG0006715 ITGA10 POLR3C ENSG00000244619
GH01J145887 Enhancer 0.6 ENCODE 0.4 -5.0 -5027 0.2 CTBP1 SOX13 RFX1 SAP130 DPF2 ZNF217 CUX1 FOS TEAD3 SMARCE1 ANKRD35 HSALNG0006715 POLR3C ENSG00000244619
GH01J145889 Enhancer 0.3 ENCODE 0.6 -2.9 -2907 0.2 SP1 TXNIP ENSG00000244619 HSALNG0006715
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000244619 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000244619 Gene

Genomic Locations for ENSG00000244619 Gene
chr1:145,892,847-145,893,483
(GRCh38/hg38)
Size:
637 bases
Orientation:
Plus strand
chr1:145,541,593-145,542,229
(GRCh37/hg19)
Size:
637 bases
Orientation:
Minus strand

Genomic View for ENSG00000244619 Gene

Genes around ENSG00000244619 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000244619 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000244619 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000244619 Gene

Proteins for ENSG00000244619 Gene

Post-translational modifications for ENSG00000244619 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000244619 Gene

Domains & Families for ENSG00000244619 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000244619 Gene

Function for ENSG00000244619 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000244619 Gene

Localization for ENSG00000244619 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000244619 Gene

Pathways & Interactions for ENSG00000244619 Gene

PathCards logo

SuperPathways for ENSG00000244619 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000244619 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000244619 Gene

Drugs & Compounds for ENSG00000244619 Gene

No Compound Related Data Available

Transcripts for ENSG00000244619 Gene

mRNA/cDNA for ENSG00000244619 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000244619 Gene

No ASD Table

Relevant External Links for ENSG00000244619 Gene

GeneLoc Exon Structure for
ENSG00000244619

Expression for ENSG00000244619 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000244619 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000244619 Gene

This gene is overexpressed in Artery - Aorta (x13.4), Artery - Coronary (x7.1), and Artery - Tibial (x5.0).
genes like me logo Genes that share expression patterns with ENSG00000244619: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000244619 Gene

Orthologs for ENSG00000244619 Gene

Evolution for ENSG00000244619 Gene

ENSEMBL:
Gene Tree for ENSG00000244619 (if available)
TreeFam:
Gene Tree for ENSG00000244619 (if available)

No data available for Orthologs for ENSG00000244619 Gene

Paralogs for ENSG00000244619 Gene

No data available for Paralogs for ENSG00000244619 Gene

Variants for ENSG00000244619 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000244619 Gene

Disorders for ENSG00000244619 Gene

No disorders were found for ENSG00000244619 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000244619 Gene

Publications for ENSG00000244619 Gene

No publications were found for ENSG00000244619 Gene.

No data available for External Links for ENSG00000244619 Gene

Products for ENSG00000244619 Gene

Sources for ENSG00000244619 Gene