Aliases for ENSG00000244468 Gene

Subcategory (RNA class) for ENSG00000244468 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000244468 Gene

  • Novel Transcript 5
  • HSALNG0029727 167
  • NONHSAG036353 92
  • AC093001.1 5
  • Lnc-HPS3-3 168

External Ids for ENSG00000244468 Gene

Previous GeneCards Identifiers for ENSG00000244468 Gene

  • GC03P149002

Summaries for ENSG00000244468 Gene

GeneCards Summary for ENSG00000244468 Gene

ENSG00000244468 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000244468 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000244468 Gene

Genomics for ENSG00000244468 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000244468 Gene

Promoters and enhancers for ENSG00000244468 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J149283 Enhancer 0.6 Ensembl dbSUPER 500.7 -1.2 -1181 0.4 CUX1 MBD2 JUND GATA3 FOXA1 SMARCA5 ENSG00000244468 piR-39098-156 piR-39099-170 TM4SF18 CPHL1P lnc-TM4SF18-1 RF01045-110
GH03J149297 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.4 +14.7 14686 5.3 ZNF217 TCF12 JUND FOS ZIC2 POLR2A TCF7 TRIM28 CUX1 ZBTB25 TM4SF18 TM4SF1 TM4SF1-AS1 CP CPHL1P piR-51855-024 lnc-TM4SF18-1 ENSG00000244468
GH03J149331 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE dbSUPER 0.3 +47.9 47940 4.2 CTCF ZNF316 MAFF POLR2A FOSL2 MAFK FOS RAD21 SMC3 JUND TM4SF18 lnc-TM4SF1-3 piR-51855-024 ENSG00000244468
GH03J149314 Enhancer 1.1 Ensembl ENCODE dbSUPER 0.3 +31.1 31078 2.9 JUND FOS KDM6A TEAD1 FOXA2 SAP130 FOSL2 ZNF205 MXD4 MAFK piR-51855-024 lnc-TM4SF1-3 ENSG00000244468
GH03J149288 Enhancer 0.3 dbSUPER 0.7 +4.4 4393 1.2 CTCF RAD21 piR-43255 TM4SF18 CPHL1P ENSG00000244468 lnc-TM4SF18-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000244468 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000244468 Gene

Genomic Locations for ENSG00000244468 Gene
chr3:149,284,782-149,333,653
(GRCh38/hg38)
Size:
48,872 bases
Orientation:
Plus strand
chr3:149,002,569-149,051,440
(GRCh37/hg19)
Size:
48,872 bases
Orientation:
Plus strand

Genomic View for ENSG00000244468 Gene

Genes around ENSG00000244468 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000244468 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000244468 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000244468 Gene

Proteins for ENSG00000244468 Gene

Post-translational modifications for ENSG00000244468 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000244468 Gene

Domains & Families for ENSG00000244468 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000244468 Gene

Function for ENSG00000244468 Gene

Phenotypes From GWAS Catalog for ENSG00000244468 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000244468 Gene

Localization for ENSG00000244468 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000244468 Gene

Pathways & Interactions for ENSG00000244468 Gene

PathCards logo

SuperPathways for ENSG00000244468 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000244468 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000244468 Gene

Drugs & Compounds for ENSG00000244468 Gene

No Compound Related Data Available

Transcripts for ENSG00000244468 Gene

mRNA/cDNA for ENSG00000244468 Gene

5 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
3 NONCODE transcripts :
3 LncBook transcripts :
4 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000244468 Gene

No ASD Table

Relevant External Links for ENSG00000244468 Gene

GeneLoc Exon Structure for
ENSG00000244468

Expression for ENSG00000244468 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000244468 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000244468 Gene

This gene is overexpressed in Breast - Mammary Tissue (x12.7).
genes like me logo Genes that share expression patterns with ENSG00000244468: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000244468 Gene

Orthologs for ENSG00000244468 Gene

Evolution for ENSG00000244468 Gene

ENSEMBL:
Gene Tree for ENSG00000244468 (if available)
TreeFam:
Gene Tree for ENSG00000244468 (if available)

No data available for Orthologs for ENSG00000244468 Gene

Paralogs for ENSG00000244468 Gene

No data available for Paralogs for ENSG00000244468 Gene

Variants for ENSG00000244468 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000244468 Gene

Disorders for ENSG00000244468 Gene

No disorders were found for ENSG00000244468 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000244468 Gene

Publications for ENSG00000244468 Gene

No publications were found for ENSG00000244468 Gene.

No data available for Mastermind for ENSG00000244468 Gene

Products for ENSG00000244468 Gene

Sources for ENSG00000244468 Gene