Aliases for ENSG00000243349 Gene

Subcategory (RNA class) for ENSG00000243349 Gene

lncRNA

Number of RNA Genes sources:

3 / 17

Aliases for ENSG00000243349 Gene

  • Novel Transcript 5
  • NONHSAG005762.2 91
  • HSALNG0077650 164
  • Lnc-ZNF22-2 165
  • AL358394.2 5

External Ids for ENSG00000243349 Gene

Previous GeneCards Identifiers for ENSG00000243349 Gene

  • GC10P045645

Summaries for ENSG00000243349 Gene

GeneCards Summary for ENSG00000243349 Gene

ENSG00000243349 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000243349 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000243349 Gene

Genomics for ENSG00000243349 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000243349 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J045159 Enhancer 0.8 FANTOM5 Ensembl ENCODE 0.3 +33.1 33083 2.8 NR3C1 FOSL1 ZNF26 ATF3 FOS FAM21FP PARGP1 ALOX5 MIR3156-1 ANKRD30BP3 ENSG00000243349 OR13A1 ZNF22
GH10J045143 Enhancer 0.5 Ensembl 0.4 +17.6 17583 2.2 ZNF512 CEBPG ATF4 ZNF366 ARID1B ANKRD30BP3 ZNF22 ENSG00000277757 RSU1P2 ENSG00000243349 CUBNP3 OR13A1
GH10J045139 Enhancer 0.3 Ensembl 0.4 +12.6 12583 0.2 SCRT2 ENSG00000277757 CUBNP3 ENSG00000243349 RSU1P2 ZNF22 OR13A1
GH10J045154 Enhancer 0.3 Ensembl 0.3 +27.5 27482 0.4 ZNF610 PKNOX1 ANKRD30BP3 RSU1P2 ZNF22 MIR3156-1 ENSG00000243349 OR13A1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000243349 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000243349 Gene

Genomic Locations for ENSG00000243349 Gene
chr10:45,127,318-45,186,041
(GRCh38/hg38)
Size:
58,724 bases
Orientation:
Plus strand
chr10:45,642,842-45,666,837
(GRCh37/hg19)
Size:
23,996 bases
Orientation:
Plus strand

Genomic View for ENSG00000243349 Gene

Genes around ENSG00000243349 on UCSC Golden Path with GeneCards custom track
ENSG00000243349 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000243349 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000243349 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000243349 Gene

Proteins for ENSG00000243349 Gene

Post-translational modifications for ENSG00000243349 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000243349 Gene

Domains & Families for ENSG00000243349 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000243349 Gene

Function for ENSG00000243349 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000243349 Gene

Localization for ENSG00000243349 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000243349 Gene

Pathways & Interactions for ENSG00000243349 Gene

PathCards logo

SuperPathways for ENSG00000243349 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000243349 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000243349 Gene

Drugs & Compounds for ENSG00000243349 Gene

No Compound Related Data Available

Transcripts for ENSG00000243349 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000243349 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00008B913F_9606 lncRNA 3637 3

Ensembl: ENST00000427229 (view in UCSC) ,

LNCipedia: lnc-ZNF22-2:3,

NONCODE: NONHSAT013081.2,

URS00008B219E_9606 lncRNA 386 3

LncBook: HSALNT0162131,

LNCipedia: lnc-ZNF22-2:4,

NONCODE: NONHSAT013082.2,

URS00008C2FAD_9606 lncRNA 1784 2

LNCipedia: lnc-ZNF22-2:2,

NONCODE: NONHSAT013079.2,

URS00008BD617_9606 lncRNA 1314 2

LNCipedia: lnc-ZNF22-2:5,

NONCODE: NONHSAT013084.2,

URS00008B3B27_9606 lncRNA 1299 2

LNCipedia: lnc-ZNF22-2:6,

NONCODE: NONHSAT013085.2,

ENSG00000243349 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000243349 Gene

No ASD Table

Relevant External Links for ENSG00000243349 Gene

GeneLoc Exon Structure for
ENSG00000243349

No data available for mRNA/cDNA for ENSG00000243349 Gene

Expression for ENSG00000243349 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000243349 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000243349 Gene

This gene is overexpressed in Testis (x40.9).
genes like me logo Genes that share expression patterns with ENSG00000243349: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000243349 Gene

Orthologs for ENSG00000243349 Gene

Evolution for ENSG00000243349 Gene

ENSEMBL:
Gene Tree for ENSG00000243349 (if available)
TreeFam:
Gene Tree for ENSG00000243349 (if available)

No data available for Orthologs for ENSG00000243349 Gene

Paralogs for ENSG00000243349 Gene

No data available for Paralogs for ENSG00000243349 Gene

Variants for ENSG00000243349 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000243349 Gene

Disorders for ENSG00000243349 Gene

No disorders were found for ENSG00000243349 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000243349 Gene

Publications for ENSG00000243349 Gene

No publications were found for ENSG00000243349 Gene.

No data available for Mastermind for ENSG00000243349 Gene

Products for ENSG00000243349 Gene

Sources for ENSG00000243349 Gene