Aliases for ENSG00000243273 Gene

Subcategory (RNA class) for ENSG00000243273 Gene

lncRNA

Number of RNA Genes sources:

3 / 14

Aliases for ENSG00000243273 Gene

  • Novel Transcript 5
  • HSALNG0029809 167
  • NONHSAG036395 92
  • Lnc-MED12L-2 168
  • AC020636.1 5

External Ids for ENSG00000243273 Gene

Previous GeneCards Identifiers for ENSG00000243273 Gene

  • GC03P150608

Summaries for ENSG00000243273 Gene

GeneCards Summary for ENSG00000243273 Gene

ENSG00000243273 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000243273 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000243273 Gene

Genomics for ENSG00000243273 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000243273 Gene

Promoters and enhancers for ENSG00000243273 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03J150888 Promoter/Enhancer 0.8 Ensembl ENCODE 500.7 -0.6 -570 3.1 CEBPG CEBPB SPI1 HLF PKNOX1 CTCF ENSG00000243273 CLRN1-AS1 ERICH6-AS1 MED12L lnc-MINDY4B-1 MINDY4B piR-32651-009 ENSG00000260234
GH03J150723 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 10.8 -156.4 -156422 22.8 EP300 FOXK2 ZNF217 POLR2G NCOR1 JUND FOS TEAD4 PHB2 ZBTB5 ERICH6-AS1 SERP1 SIAH2 ERICH6 SIAH2-AS1 ENSG00000243273 MINDY4B SELENOT TSC22D2 CLRN1
GH03J150865 Enhancer 1 Ensembl ENCODE 12.4 -25.1 -25063 0.7 ZNF217 CTCF NRF1 MYC CLOCK ZBTB26 REST CUX1 RAD21 EP300 ENSG00000243273 MINDY4B CLRN1 piR-32651-009 CLRN1-AS1 SIAH2-AS1
GH03J151145 Enhancer 0.9 ENCODE dbSUPER 10.8 +255.6 255571 1.7 CTCF JUND REST RAD21 TRIM22 SMC3 MXI1 DEK GATA3 CEBPG MED12L P2RY14 MINDY4B ENSG00000243273 CLRN1 CLRN1-AS1 RF00994-691 lnc-SELENOT-5
GH03J151002 Enhancer 0.7 Ensembl ENCODE 10.3 +112.5 112538 1.7 ZNF316 MAFF MAFK SMAD4 BCL6 GLIS1 JUND FOS GATAD2A CREB1 RF00017-4140 CLRN1 MED12L CLRN1-AS1 MINDY4B ENSG00000243273 piR-41306-194
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000243273 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000243273 Gene

Genomic Locations for ENSG00000243273 Gene
chr3:150,890,636-151,038,818
(GRCh38/hg38)
Size:
148,183 bases
Orientation:
Plus strand
chr3:150,608,423-150,756,605
(GRCh37/hg19)
Size:
148,183 bases
Orientation:
Plus strand

Genomic View for ENSG00000243273 Gene

Genes around ENSG00000243273 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000243273 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000243273 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000243273 Gene

Proteins for ENSG00000243273 Gene

Post-translational modifications for ENSG00000243273 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000243273 Gene

Domains & Families for ENSG00000243273 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000243273 Gene

Function for ENSG00000243273 Gene

Phenotypes From GWAS Catalog for ENSG00000243273 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000243273 Gene

Localization for ENSG00000243273 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000243273 Gene

Pathways & Interactions for ENSG00000243273 Gene

PathCards logo

SuperPathways for ENSG00000243273 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000243273 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000243273 Gene

Drugs & Compounds for ENSG00000243273 Gene

No Compound Related Data Available

Transcripts for ENSG00000243273 Gene

mRNA/cDNA for ENSG00000243273 Gene

4 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
4 NONCODE transcripts :
3 LncBook transcripts :
2 LNCipedia transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000243273 Gene

No ASD Table

Relevant External Links for ENSG00000243273 Gene

GeneLoc Exon Structure for
ENSG00000243273

Expression for ENSG00000243273 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000243273 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000243273 Gene

This gene is overexpressed in Whole Blood (x50.6).
genes like me logo Genes that share expression patterns with ENSG00000243273: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000243273 Gene

Orthologs for ENSG00000243273 Gene

Evolution for ENSG00000243273 Gene

ENSEMBL:
Gene Tree for ENSG00000243273 (if available)
TreeFam:
Gene Tree for ENSG00000243273 (if available)

No data available for Orthologs for ENSG00000243273 Gene

Paralogs for ENSG00000243273 Gene

No data available for Paralogs for ENSG00000243273 Gene

Variants for ENSG00000243273 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000243273 Gene

Disorders for ENSG00000243273 Gene

No disorders were found for ENSG00000243273 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000243273 Gene

Publications for ENSG00000243273 Gene

No publications were found for ENSG00000243273 Gene.

No data available for Mastermind for ENSG00000243273 Gene

Products for ENSG00000243273 Gene

Sources for ENSG00000243273 Gene