Aliases for ENSG00000241577 Gene

Subcategory (RNA class) for ENSG00000241577 Gene

lncRNA

Number of RNA Genes sources:

2 / 17

Aliases for ENSG00000241577 Gene

  • Novel Transcript, Sense Intronic To LRRC18 5
  • HSALNG0077855 164
  • Lnc-LRRC18-1 165
  • AC060234.3 5

External Ids for ENSG00000241577 Gene

Previous GeneCards Identifiers for ENSG00000241577 Gene

  • GC10M050092

Summaries for ENSG00000241577 Gene

GeneCards Summary for ENSG00000241577 Gene

ENSG00000241577 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000241577 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000241577 Gene

Genomics for ENSG00000241577 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for ENSG00000241577 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J048935 Promoter/Enhancer 0.6 EPDnew Ensembl 600.7 +0.0 13 0.8 PRDM10 ENSG00000241577 LRRC18 ENSG00000228403 WDFY4
GH10J048701 Enhancer 1 Ensembl ENCODE dbSUPER 10.4 +230.1 230112 9.4 RAD21 FOXJ2 NFE2 CTCF USF1 SMC3 MAFG IKZF1 NR2F1 SPI1 WDFY4 ARHGAP22 ENSG00000241577 LRRC18 DRGX RPL13AP19
GH10J049008 Enhancer 0.7 Ensembl ENCODE 10.4 -74.8 -74788 4.4 NR2C2 NR2F2 POLR2A NR2F1 NR2F6 MEIS2 SMARCA4 L3MBTL2 CBFA2T2 NR2C1 VSTM4 FAM170B ENSG00000226576 FAM170B-AS1 WDFY4 DRGX LRRC18 ENSG00000241577 lnc-LRRC18-110 ENSG00000233665
GH10J048894 Enhancer 0.4 Ensembl ENCODE 10.7 +39.5 39545 2.3 NFIB ENSG00000241577 LRRC18 WDFY4 ENSG00000228403
GH10J048880 Enhancer 0.3 Ensembl 11.2 +54.7 54712 0.6 ZIC2 ZNF680 ENSG00000241577 LRRC18 WDFY4 ENSG00000228403
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000241577 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for ENSG00000241577 Gene

Genomic Locations for ENSG00000241577 Gene
chr10:48,883,955-48,935,213
(GRCh38/hg38)
Size:
51,259 bases
Orientation:
Minus strand
chr10:50,092,000-50,143,258
(GRCh37/hg19)
Size:
51,259 bases
Orientation:
Minus strand

Genomic View for ENSG00000241577 Gene

Genes around ENSG00000241577 on UCSC Golden Path with GeneCards custom track
ENSG00000241577 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Cytogenetic band:
ENSG00000241577 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000241577 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000241577 Gene

Proteins for ENSG00000241577 Gene

Post-translational modifications for ENSG00000241577 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000241577 Gene

Domains & Families for ENSG00000241577 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000241577 Gene

Function for ENSG00000241577 Gene

Phenotypes From GWAS Catalog for ENSG00000241577 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000241577 Gene

Localization for ENSG00000241577 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000241577 Gene

Pathways & Interactions for ENSG00000241577 Gene

PathCards logo

SuperPathways for ENSG00000241577 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000241577 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000241577 Gene

Drugs & Compounds for ENSG00000241577 Gene

No Compound Related Data Available

Transcripts for ENSG00000241577 Gene

Non-coding RNA (ncRNA) Transcripts from RNAcentral for ENSG00000241577 Gene

RNAcentral Transcript ID Subcategory Length (nts) # of Sources Source Identifiers and Annotations
URS00001C7E95_9606 lncRNA 559 3

Ensembl: ENST00000430438 (view in UCSC) ,

LncBook: HSALNT0162476,

LNCipedia: lnc-LRRC18-1:1,

ENSG00000241577 in the GeneCards ncRNA compendium hub on the UCSC Golden Path

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000241577 Gene

No ASD Table

Relevant External Links for ENSG00000241577 Gene

GeneLoc Exon Structure for
ENSG00000241577

No data available for mRNA/cDNA for ENSG00000241577 Gene

Expression for ENSG00000241577 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000241577 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000241577 Gene

This gene is overexpressed in Testis (x43.2).
genes like me logo Genes that share expression patterns with ENSG00000241577: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000241577 Gene

Orthologs for ENSG00000241577 Gene

Evolution for ENSG00000241577 Gene

ENSEMBL:
Gene Tree for ENSG00000241577 (if available)
TreeFam:
Gene Tree for ENSG00000241577 (if available)

No data available for Orthologs for ENSG00000241577 Gene

Paralogs for ENSG00000241577 Gene

No data available for Paralogs for ENSG00000241577 Gene

Variants for ENSG00000241577 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000241577 Gene

Disorders for ENSG00000241577 Gene

No disorders were found for ENSG00000241577 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000241577 Gene

Publications for ENSG00000241577 Gene

No publications were found for ENSG00000241577 Gene.

No data available for Mastermind for ENSG00000241577 Gene

Products for ENSG00000241577 Gene

Sources for ENSG00000241577 Gene