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Aliases for ENSG00000239920 Gene

Aliases for ENSG00000239920 Gene

  • Uncharacterized Protein 13
  • Novel Transcript 5
  • AC104389.4 5

External Ids for ENSG00000239920 Gene

Previous GeneCards Identifiers for ENSG00000239920 Gene

  • GC11M005593
  • GC11M005596
  • GC11M005603
  • GC11M005610
  • GC11M005617
  • GC11M005623

Summaries for ENSG00000239920 Gene

GeneCards Summary for ENSG00000239920 Gene

ENSG00000239920 is a Protein Coding gene. An important paralog of this gene is TRIM5.

Additional gene information for ENSG00000239920 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ENSG00000239920 Gene

Genomics for ENSG00000239920 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000239920 Gene

Promoters and enhancers for ENSG00000239920 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J005679 Promoter 0.6 EPDnew 600.7 -1.4 -1435 0.1 NFE2 ENSG00000239920 TRIM5 HBG2 TRIM6 OR52D1 TRIM22
GH11J005618 Promoter/Enhancer 2 EPDnew Ensembl ENCODE dbSUPER 13.5 +58.1 58085 3.8 CBFA2T2 IKZF1 CEBPA ZNF7 REST CTBP1 FOXA2 EP300 SCRT2 SP1 TRIM34 TRIM5 UBQLNL ENSG00000239920 HBG2 TRIM6 TRIM22 TRIM6-TRIM34 GC11P005579
GH11J005683 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 0.4 -6.5 -6452 3 SP1 CC2D1A CTCF ZNF148 NKRF POLR2A MLLT1 GTF2F1 TRIM24 ELF1 TRIM5 TRIM22 HBG2 TRIM6 OR52D1 OR52N3P ENSG00000239920
GH11J005623 Promoter/Enhancer 2.1 EPDnew FANTOM5 Ensembl ENCODE 0.2 +53.0 52998 3.2 SP1 RELA ZBED1 IKZF1 POLR2A RXRA IKZF2 PKNOX1 SMAD5 HDAC1 TRIM34 TRIM5 TRIM22 OR51B2 OR56B4 OR56A1 OR56A3 OR52N4 OR51Q1 OR52E6
GH11J005631 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.3 +46.3 46319 1.4 RELA TRIM22 PAX8 DPF2 RUNX3 BCLAF1 BCL11A NBN IRF4 BATF TRIM34 TRIM6-TRIM34 ENSG00000239920 GC11P005579 TRIM5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000239920 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000239920 Gene

Genomic Locations for ENSG00000239920 Gene
chr11:5,254,392-5,678,434
(GRCh38/hg38)
Size:
424,043 bases
Orientation:
Minus strand
chr11:5,593,552-5,646,126
(GRCh37/hg19)
Size:
52,575 bases
Orientation:
Minus strand

Genomic View for ENSG00000239920 Gene

Genes around ENSG00000239920 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000239920 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000239920 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000239920 Gene

Proteins for ENSG00000239920 Gene

  • Protein details for ENSG00000239920 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A2U3TZJ3-A0A2U3TZJ3_HUMAN
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A2U3TZJ3

    Protein attributes for ENSG00000239920 Gene

    Size:
    80 amino acids
    Molecular mass:
    9509 Da
    Quaternary structure:
    No Data Available

neXtProt entry for ENSG00000239920 Gene

Post-translational modifications for ENSG00000239920 Gene

No Post-translational modifications

Other Protein References for ENSG00000239920 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for ENSG00000239920 Gene

Domains & Families for ENSG00000239920 Gene

Protein Domains for ENSG00000239920 Gene

InterPro:
ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ENSG00000239920: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ENSG00000239920 Gene

Function for ENSG00000239920 Gene

Phenotypes From GWAS Catalog for ENSG00000239920 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000239920 Gene

Localization for ENSG00000239920 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000239920 Gene

Pathways & Interactions for ENSG00000239920 Gene

PathCards logo

SuperPathways for ENSG00000239920 Gene

No Data Available

Interacting Proteins for ENSG00000239920 Gene

STRING Interaction Network Preview (showing top 5 STRING interactants - click image to see top 25)
https://version11.string-db.org/api/image/network?species=9606&limit=0&targetmode=proteins&caller_identity=gene_cards&network_flavor=evidence&identifiers=9606.ENSP00000369609%0d9606.ENSP00000322421%0d9606.ENSP00000251595%0d9606.ENSP00000344903%0d9606.ENSP00000345393%0d9606.ENSP00000350369%0d
Selected Interacting proteins: ENSP00000369609 for ENSG00000239920 Gene via STRING

Gene Ontology (GO) - Biological Process for ENSG00000239920 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006914 autophagy IEA --
GO:0016567 protein ubiquitination IEA --
GO:0045087 innate immune response IEA --
GO:0051607 defense response to virus IEA --
genes like me logo Genes that share ontologies with ENSG00000239920: view

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000239920 Gene

Drugs & Compounds for ENSG00000239920 Gene

No Compound Related Data Available

Transcripts for ENSG00000239920 Gene

mRNA/cDNA for ENSG00000239920 Gene

(5) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000239920 Gene

No ASD Table

Relevant External Links for ENSG00000239920 Gene

GeneLoc Exon Structure for
ENSG00000239920

Expression for ENSG00000239920 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000239920 Gene

genes like me logo Genes that share expression patterns with ENSG00000239920: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000239920 Gene

Orthologs for ENSG00000239920 Gene

Evolution for ENSG00000239920 Gene

ENSEMBL:
Gene Tree for ENSG00000239920 (if available)
TreeFam:
Gene Tree for ENSG00000239920 (if available)

No data available for Orthologs for ENSG00000239920 Gene

Paralogs for ENSG00000239920 Gene

genes like me logo Genes that share paralogs with ENSG00000239920: view

Variants for ENSG00000239920 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000239920 Gene

Disorders for ENSG00000239920 Gene

No disorders were found for ENSG00000239920 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000239920 Gene

Publications for ENSG00000239920 Gene

  1. Human chromosome 11 DNA sequence and analysis including novel gene identification. (PMID: 16554811) Taylor TD … Sakaki Y (Nature 2006) 13 58

No data available for External Links for ENSG00000239920 Gene

Products for ENSG00000239920 Gene

Sources for ENSG00000239920 Gene

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