Aliases for ENSG00000238246 Gene

Subcategory (RNA class) for ENSG00000238246 Gene

lncRNA

Quality Score for this RNA gene is

14

Aliases for ENSG00000238246 Gene

  • Novel Transcript 5
  • NONHSAG005359 94
  • HSALNG0076534 169
  • AC069549.1 5
  • Lnc-NEBL-1 170

External Ids for ENSG00000238246 Gene

Previous GeneCards Identifiers for ENSG00000238246 Gene

  • GC10M020359

Summaries for ENSG00000238246 Gene

GeneCards Summary for ENSG00000238246 Gene

ENSG00000238246 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000238246 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000238246 Gene

Genomics for ENSG00000238246 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000238246 Gene

Promoters and enhancers for ENSG00000238246 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J020002 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 10.7 +87.3 87292 3.5 SP1 MYC ETV6 CEBPB RAD21 NKRF MLLT1 ZNF687 CREM ZBED1 PLXDC2 ENSG00000238246 piR-32214-040 piR-31937-020
GH10J019929 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 10.1 +160.8 160783 5.2 FOXA1 RAD21 SP1 RXRA FOXA2 MAFK JUND FOS ATF3 YY1 ENSG00000238246 piR-31937-020 piR-32214-040 PLXDC2
GH10J019966 Enhancer 1 Ensembl ENCODE CraniofacialAtlas dbSUPER 11.1 +120.9 120883 9 PKNOX1 POLR2A KLF4 RCOR1 ATF2 SIN3A ENSG00000238246 PLXDC2 piR-32214-040 piR-31937-020
GH10J019979 Enhancer 0.9 Ensembl ENCODE dbSUPER 10.8 +104.4 104383 19.2 ZNF24 SP1 IKZF1 RXRA IKZF2 ATF7 BCL11A USF1 CUX1 RAD21 ENSG00000238246 PLXDC2 piR-32214-040 piR-31937-020
GH10J019917 Enhancer 1 Ensembl ENCODE dbSUPER 9.9 +171.2 171165 7.2 HLF ELF3 PKNOX1 CEBPA RFX1 FOXA1 FOXA2 TEAD1 CREM FOXP1 PLXDC2 ENSG00000238246 piR-31937-020 piR-32214-040
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000238246 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000238246 Gene

Genomic Locations for ENSG00000238246 Gene
chr10:20,070,805-20,091,784
(GRCh38/hg38)
Size:
20,980 bases
Orientation:
Minus strand
chr10:20,359,734-20,380,713
(GRCh37/hg19)
Size:
20,980 bases
Orientation:
Minus strand

Genomic View for ENSG00000238246 Gene

Genes around ENSG00000238246 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000238246 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000238246 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000238246 Gene

Proteins for ENSG00000238246 Gene

Post-translational modifications for ENSG00000238246 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000238246 Gene

Domains & Families for ENSG00000238246 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000238246 Gene

Function for ENSG00000238246 Gene

Phenotypes From GWAS Catalog for ENSG00000238246 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000238246 Gene

Localization for ENSG00000238246 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000238246 Gene

Pathways & Interactions for ENSG00000238246 Gene

PathCards logo

SuperPathways for ENSG00000238246 Gene

No Data Available

Gene Ontology (GO) - Biological Process for ENSG00000238246 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ENSG00000238246 Gene

Drugs & Compounds for ENSG00000238246 Gene

No Compound Related Data Available

Transcripts for ENSG00000238246 Gene

mRNA/cDNA for ENSG00000238246 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
(1) RNACentral transcripts :
(1) NONCODE transcripts :
(1) LNCipedia transcripts :
(1) LncBook transcripts :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000238246 Gene

No ASD Table

Relevant External Links for ENSG00000238246 Gene

GeneLoc Exon Structure for
ENSG00000238246

Expression for ENSG00000238246 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ENSG00000238246 Gene

mRNA differential expression in normal tissues according to GTEx for ENSG00000238246 Gene

This gene is overexpressed in Whole Blood (x6.2).
genes like me logo Genes that share expression patterns with ENSG00000238246: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000238246 Gene

Orthologs for ENSG00000238246 Gene

Evolution for ENSG00000238246 Gene

ENSEMBL:
Gene Tree for ENSG00000238246 (if available)
TreeFam:
Gene Tree for ENSG00000238246 (if available)

No data available for Orthologs for ENSG00000238246 Gene

Paralogs for ENSG00000238246 Gene

No data available for Paralogs for ENSG00000238246 Gene

Variants for ENSG00000238246 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000238246 Gene

Disorders for ENSG00000238246 Gene

No disorders were found for ENSG00000238246 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000238246 Gene

Publications for ENSG00000238246 Gene

No publications were found for ENSG00000238246 Gene.

No data available for External Links for ENSG00000238246 Gene

Products for ENSG00000238246 Gene

Sources for ENSG00000238246 Gene