Aliases for ENSG00000238019 Gene

Subcategory (RNA class) for ENSG00000238019 Gene

lncRNA

Number of RNA Genes sources:

0 / 14

Aliases for ENSG00000238019 Gene

  • Novel Transcript 5
  • AL360169.1 5

External Ids for ENSG00000238019 Gene

Previous GeneCards Identifiers for ENSG00000238019 Gene

  • GC06M158818

Summaries for ENSG00000238019 Gene

GeneCards Summary for ENSG00000238019 Gene

ENSG00000238019 is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for ENSG00000238019 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for ENSG00000238019 Gene

Genomics for ENSG00000238019 Gene

GeneHancer (GH) Regulatory Elements for ENSG00000238019 Gene

Promoters and enhancers for ENSG00000238019 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06J158397 Enhancer 0.7 Ensembl dbSUPER 500.7 -0.1 -140 1.8 NR2F2 ZFHX2 FOS NR2F1 PRDM6 GATA2 JUN TRIM28 ZNF677 MAX ENSG00000238019 TULP4 SNX9 tRX-Val-NNN-1-1 ENSG00000274023
GH06J158398 Enhancer 0.3 Ensembl 500.7 +1.4 1360 0.4 ZNF707 ENSG00000238019 piR-51006-011 ENSG00000274023 TULP4
GH06J158230 Promoter/Enhancer 2 EPDnew Ensembl ENCODE CraniofacialAtlas 11.2 +166.0 165960 3.6 SIN3A NRF1 USF1 POLR2G SP1 FOS ZIC2 REST ZBTB11 AFF1 TULP4 lnc-TULP4-2 lnc-SERAC1-14 ENSG00000238019 DYNLT1 SYTL3 SYNJ2 lnc-SERAC1-8
GH06J158474 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 11.2 -76.9 -76939 3 SIN3A JUND EP300 TRIM28 RELA MEF2C RCOR1 TRIM22 POLR2A ZNF341 KR153203-006 ENSG00000238019 DYNLT1 SYTL3 SERAC1 lnc-TMEM181-2 TULP4
GH06J158283 Promoter/Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas 11.4 +113.0 112964 4.9 ZSCAN5C JUND ZIC2 ZNF423 KLF7 ATF2 HDAC2 RBM25 OSR2 BCL11A TULP4 ENSG00000238019 ENSG00000274023 lnc-GTF2H5-24 piR-46847-235 lnc-GTF2H5-2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around ENSG00000238019 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ENSG00000238019 Gene

Genomic Locations for ENSG00000238019 Gene
chr6:158,397,885-158,398,561
(GRCh38/hg38)
Size:
677 bases
Orientation:
Minus strand
chr6:158,818,917-158,819,593
(GRCh37/hg19)
Size:
677 bases
Orientation:
Minus strand

Genomic View for ENSG00000238019 Gene

Genes around ENSG00000238019 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ENSG00000238019 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ENSG00000238019 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for ENSG00000238019 Gene

Proteins for ENSG00000238019 Gene

Post-translational modifications for ENSG00000238019 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ENSG00000238019 Gene

Domains & Families for ENSG00000238019 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for ENSG00000238019 Gene

Function for ENSG00000238019 Gene

Phenotypes From GWAS Catalog for ENSG00000238019 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ENSG00000238019 Gene

Localization for ENSG00000238019 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ENSG00000238019 Gene

Pathways & Interactions for ENSG00000238019 Gene

PathCards logo

SuperPathways for ENSG00000238019 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for ENSG00000238019 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for ENSG00000238019 Gene

Drugs & Compounds for ENSG00000238019 Gene

No Compound Related Data Available

Transcripts for ENSG00000238019 Gene

mRNA/cDNA for ENSG00000238019 Gene

1 RNACentral transcripts :
1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ENSG00000238019 Gene

No ASD Table

Relevant External Links for ENSG00000238019 Gene

GeneLoc Exon Structure for
ENSG00000238019

Expression for ENSG00000238019 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for ENSG00000238019 Gene

genes like me logo Genes that share expression patterns with ENSG00000238019: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ENSG00000238019 Gene

Orthologs for ENSG00000238019 Gene

Evolution for ENSG00000238019 Gene

ENSEMBL:
Gene Tree for ENSG00000238019 (if available)
TreeFam:
Gene Tree for ENSG00000238019 (if available)

No data available for Orthologs for ENSG00000238019 Gene

Paralogs for ENSG00000238019 Gene

No data available for Paralogs for ENSG00000238019 Gene

Variants for ENSG00000238019 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for ENSG00000238019 Gene

Disorders for ENSG00000238019 Gene

No disorders were found for ENSG00000238019 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for ENSG00000238019 Gene

Publications for ENSG00000238019 Gene

No publications were found for ENSG00000238019 Gene.

No data available for Mastermind for ENSG00000238019 Gene

Products for ENSG00000238019 Gene

Sources for ENSG00000238019 Gene